6B2Z Membrane Protein date Sep 20, 2017
title Cryo-Em Structure Of The Dimeric Fo Region Of Yeast Mitochon Synthase
authors H.Guo, J.L.Rubinstein
compound source
Molecule: Atp Synthase Subunit C, Mitochondrial
Chain: 1, 2, 3, 4, 5, 6, 7, 8, 9, 0, C, D, E, F, G, H, I, J
Synonym: Lipid-Binding Protein,Oligomycin Resistance Protei Synthase Subunit 9, Mitochondrial;
 Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Atp Synthase Protein 8
Chain: A, L
Synonym: A6l,Atp-Associated Protein 1,F-Atpase Subunit 8
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Atp Synthase Subunit A
Chain: a, M
Synonym: F-Atpase Protein 6
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Atp Synthase Subunit B
Chain: b, N
Organism_scientific: Saccharomyces Cerevisiae
Organism_taxid: 4932
Strain: W303-1a

Molecule: Atp Synthase Subunit D, Mitochondrial
Chain: d, O
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Atp Synthase Subunit E, Mitochondrial
Chain: e, P
Synonym: Atpase Subunit E,Translocase Of The Inner Membrane 11;
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Atp Synthase Subunit F, Mitochondrial
Chain: f, Q
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Atp Synthase Subunit G
Chain: g, R
Organism_scientific: Saccharomyces Cerevisiae
Organism_taxid: 4932
Strain: W303-1a

Molecule: Atp Synthase Subunit J, Mitochondrial
Chain: I, S
Synonym: Atpase Synthase I Subunit
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c

Molecule: Atp Synthase Subunit K, Mitochondrial
Chain: k, T
Organism_scientific: Saccharomyces Cerevisiae (Strain Atcc S288c);
Organism_common: Baker'S Yeast
Organism_taxid: 559292
Strain: Atcc 204508 S288c
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 3.60 Å
Gene
Ontology
ChainFunctionProcessComponent
K, 7, E, 2, 1, J, B, H, D, I, G, F, 0, C, 6, 3, 9, 8, 4, 5


L, A


N, b


Q, f


S, i


T, k

  • mitochondrial proton-transpo...
    • a, M


    d, O


    Primary referenceAtomic model for the dimeric FO region of mitochondrial ATP synthase., Guo H, Bueler SA, Rubinstein JL, Science. 2017 Oct 26. pii: eaao4815. doi: 10.1126/science.aao4815. PMID:29074581
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (468 Kb) [Save to disk]
  • Biological Unit Coordinates (6b2z.pdb1.gz) 460 Kb
  • CSU: Contacts of Structural Units for 6B2Z
  • Retrieve 6B2Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6B2Z from S2C, [Save to disk]
    • View 6B2Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6B2Z
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6b2z_0] [6b2z_a] [6b2z_8] [6b2z_N] [6b2z_2] [6b2z_B] [6b2z_C] [6b2z_7] [6b2z_G] [6b2z_9] [6b2z_O] [6b2z_1] [6b2z_R] [6b2z_M] [6b2z_6] [6b2z_A] [6b2z_5] [6b2z_T] [6b2z_4] [6b2z_D] [6b2z_i] [6b2z_E] [6b2z_f] [6b2z_J] [6b2z_I] [6b2z_H] [6b2z_P] [6b2z_k] [6b2z_d] [6b2z_F] [6b2z_e] [6b2z_3] [6b2z_S] [6b2z_L] [6b2z_g] [6b2z_b] [6b2z_K] [6b2z_Q]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6B2Z
  • Community annotation for 6B2Z at PDBWiki (http://pdbwiki.org)

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