6B82	Oxidoreductase	date	Oct 05, 2017
title	Zebra Fish Cyp-450 17a1 Mutant Abiraterone Complex
authors	P.S.Pallan, M.Egli
compound		source
Molecule: Cytochrome P450, Family 17, Subfamily A, Polypept Chain: A, B Engineered: Yes Other_details: Zebrafish Quintuple Mutant 17a1 Cyp450		Organism_scientific: Danio Rerio Organism_common: Zebrafish Organism_taxid: 7955 Gene: Cyp17a1 Expression_system: Escherichia Coli Expression_system_taxid: 511693 Expression_system_strain: Bl21 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet17
symmetry	Space Group: P 41 2 2	R_factor 0.193 R_Free 0.255
crystal cell	length a length b length c angle alpha angle beta angle gamma 104.920 104.920 235.000 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	3.03 Å
ligand	ACT, AER, CL, HEM	enzyme
Gene Ontology	Chain Function Process Component A, B
Primary reference	Inherent steroid 17alpha,20-lyase activity in defunct cytochrome P450 17A enzymes., Gonzalez E, Johnson KM, Pallan PS, Phan TTN, Zhang W, Lei LI, Wawrzak Z, Yoshimoto FK, Egli M, Guengerich FP, J Biol Chem. 2017 Dec 6. pii: RA117.000504. doi: 10.1074/jbc.RA117.000504. PMID:29212707

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (159 Kb) [Save to disk] Biological Unit Coordinates (6b82.pdb1.gz) 151 Kb LPC: Ligand-Protein Contacts for 6B82 CSU: Contacts of Structural Units for 6B82 Structure Factors (417 Kb) Retrieve 6B82 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 6B82 from S2C, [Save to disk]

View 6B82 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 6B82

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [6b82_B] [6b82_A] SWISS-PROT database: Domain organization of by SWISSPFAM

Other resources with information on 6B82

Community annotation for 6B82 at PDBWiki (http://pdbwiki.org)

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---