6BPQ Transport Protein date Nov 25, 2017
title Structure Of The Cold- And Menthol-Sensing Ion Channel Trpm8
authors Y.Yin, M.Wu, L.Zubcevic, W.F.Borschel, G.C.Lander, S.Y.Lee
compound source
Molecule: Transient Receptor Potential Cation Channel Subfa Member 8;
Chain: A, B, C, D
Engineered: Yes
Mutation: Yes
 Organism_scientific: Ficedula Albicollis
Organism_common: Collared Flycatcher
Organism_taxid: 59894
Gene: Trpm8
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
symmetry Space Group: P 1
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
1.000 1.000 1.000 90.00 90.00 90.00
method Electron Microscopyresolution 4.10 Å
Gene
Ontology
ChainFunctionProcessComponent
A, D, C, B


Primary referenceStructure of the cold- and menthol-sensing ion channel TRPM8., Yin Y, Wu M, Zubcevic L, Borschel WF, Lander GC, Lee SY, Science. 2017 Dec 7. pii: science.aan4325. doi: 10.1126/science.aan4325. PMID:29217583
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (411 Kb) [Save to disk]
  • Biological Unit Coordinates (6bpq.pdb1.gz) 401 Kb
  • CSU: Contacts of Structural Units for 6BPQ
  • Retrieve 6BPQ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6BPQ from S2C, [Save to disk]
    • View 6BPQ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6BPQ
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6bpq_D] [6bpq_C] [6bpq_B] [6bpq_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6BPQ
  • Community annotation for 6BPQ at PDBWiki (http://pdbwiki.org)

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