6BQH Membrane Protein date Nov 27, 2017
title Crystal Structure Of 5-Ht2c In Complex With Ritanserin
authors Y.Peng, J.D.Mccorvy, K.Harpsoe, K.Lansu, S.Yuan, P.Popov, L.Qu, M.P L.F.Nikolajse, X.P.Huang, Y.Wu, L.Shen, W.E.Bjorn-Yoshimoto, K.D D.Wacker, G.W.Han, J.Cheng, V.Katritch, A.A.Jensen, M.A.Hanson, S D.E.Gloriam, B.L.Roth, R.C.Stevens, Z.Liu
compound source
Molecule: 5-Hydroxytryptamine Receptor 2c,Soluble Cytochrom
Chain: A
Synonym: 5-Htr2c,5-Hydroxytryptamine Receptor 1c,5-Ht1c,Ser Receptor 2c,Cytochrome B-562;
Engineered: Yes
Organism_scientific: Homo Sapiens, Escherichia Coli
Organism_common: Human
Organism_taxid: 9606, 562
Gene: Htr2c, Htr1c, Cybc
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
symmetry Space Group: C 2 2 2
R_factor 0.253 R_Free 0.275
crystal
cell
length a length b length c angle alpha angle beta angle gamma
88.310 97.050 150.230 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.70 Å
ligand E2J, OLA, OLC, PEG enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary reference5-HT2C Receptor Structures Reveal the Structural Basis of GPCR Polypharmacology., Peng Y, McCorvy JD, Harpsoe K, Lansu K, Yuan S, Popov P, Qu L, Pu M, Che T, Nikolajsen LF, Huang XP, Wu Y, Shen L, Bjorn-Yoshimoto WE, Ding K, Wacker D, Han GW, Cheng J, Katritch V, Jensen AA, Hanson MA, Zhao S, Gloriam DE, Roth BL, Stevens RC, Liu ZJ, Cell. 2018 Feb 8;172(4):719-730.e14. doi: 10.1016/j.cell.2018.01.001. Epub 2018, Feb 1. PMID:29398112
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (123 Kb) [Save to disk]
  • Biological Unit Coordinates (6bqh.pdb1.gz) 116 Kb
  • LPC: Ligand-Protein Contacts for 6BQH
  • CSU: Contacts of Structural Units for 6BQH
  • Structure Factors (534 Kb)
  • Retrieve 6BQH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6BQH from S2C, [Save to disk]
  • View 6BQH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 6BQH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6bqh_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 6BQH
  • Community annotation for 6BQH at PDBWiki (http://pdbwiki.org)

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