6ISO Hydrolase date Nov 17, 2018
title Human Sirt3 Recognizing H3k4cr
authors Y.Wang, Q.Hao
compound source
Molecule: Nad-Dependent Protein Deacetylase Sirtuin-3, Mito
Chain: A, B, E, G, I, K
Synonym: Hsirt3,Regulatory Protein Sir2 Homolog 3,Sir2-Like 3;
Ec: 3.5.1.-
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Sirt3, Sir2l3
Expression_system: Escherichia Coli-Pichia Pastoris Shuttle Ppparg4;
Expression_system_taxid: 1182032

Molecule: Arg-Thr-Lys-Gln-Thr-Ala-Arg
Chain: C, D, F, H, L, J
Engineered: Yes
Synthetic: Yes
Organism_scientific: Synthetic Construct
Organism_taxid: 32630
symmetry Space Group: P 43 21 2
R_factor 0.221 R_Free 0.275
crystal
cell
length a length b length c angle alpha angle beta angle gamma
138.085 138.085 225.342 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.95 Å
ligand CRD, GOL, ZN enzyme Hydrolase E.C.3.5.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, K, I, G, E, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (252 Kb) [Save to disk]
  • Biological Unit Coordinates (6iso.pdb1.gz) 48 Kb
  • Biological Unit Coordinates (6iso.pdb2.gz) 47 Kb
  • Biological Unit Coordinates (6iso.pdb3.gz) 47 Kb
  • Biological Unit Coordinates (6iso.pdb4.gz) 46 Kb
  • Biological Unit Coordinates (6iso.pdb5.gz) 36 Kb
  • Biological Unit Coordinates (6iso.pdb6.gz) 44 Kb
  • LPC: Ligand-Protein Contacts for 6ISO
  • CSU: Contacts of Structural Units for 6ISO
  • Structure Factors (1382 Kb)
  • Retrieve 6ISO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6ISO from S2C, [Save to disk]
    • View 6ISO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6ISO
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6iso_I] [6iso_H] [6iso_C] [6iso_B] [6iso_F] [6iso_G] [6iso_A] [6iso_E] [6iso_D] [6iso_K] [6iso_L] [6iso_J]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6ISO
  • Community annotation for 6ISO at PDBWiki (http://pdbwiki.org)

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