6Q7N Hydrolase date Dec 13, 2018
title Crystal Structure Of Bh32 Alkylated With The Mechanistic Inh Bromoacetophenone
authors C.W.Levy
compound source
Molecule: Bh32
Chain: A
Engineered: Yes
 Organism_scientific: Pyrococcus Horikoshii
Organism_taxid: 53953
Gene: Ph0459
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 1 21 1
R_factor 0.197 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
34.571 70.549 53.004 90.00 103.48 90.00
method X-Ray Diffractionresolution 2.02 Å
ligand AC0 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceDesign and evolution of an enzyme with a non-canonical organocatalytic mechanism., Burke AJ, Lovelock SL, Frese A, Crawshaw R, Ortmayer M, Dunstan M, Levy C, Green AP, Nature. 2019 May 27. pii: 10.1038/s41586-019-1262-8. doi:, 10.1038/s41586-019-1262-8. PMID:31132786
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (119 Kb) [Save to disk]
  • Biological Unit Coordinates (6q7n.pdb1.gz) 115 Kb
  • LPC: Ligand-Protein Contacts for 6Q7N
  • CSU: Contacts of Structural Units for 6Q7N
  • Structure Factors (579 Kb)
  • Retrieve 6Q7N in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6Q7N from S2C, [Save to disk]
    • View 6Q7N in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6Q7N
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6q7n_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6Q7N
  • Community annotation for 6Q7N at PDBWiki (http://pdbwiki.org)

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