6ZVG Transferase date Jul 24, 2020
title Psychrophilic Aromatic Amino Acids Aminotransferase From Psy Sp. B6 Cocrystalized With Substrate Analog - L-Indole-3-Lac
authors J.Rum, M.Rutkiewicz, A.Pruska, A.Bujacz, A.J.Pietrzyk-Brzezinska
compound source
Molecule: Aminotransferase
Chain: A, B, C, D
Ec: 2.6.1.-
Engineered: Yes
 Organism_scientific: Psychrobacter Sp. B6
Organism_taxid: 408968
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.191 R_Free 0.247
crystal
cell
length a length b length c angle alpha angle beta angle gamma
177.267 82.286 98.208 90.00 106.42 90.00
method X-Ray Diffractionresolution 2.59 Å
ligand 3IL, MG, NO3, PLP enzyme Transferase E.C.2.6.1 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (521 Kb) [Save to disk]
  • Biological Unit Coordinates (6zvg.pdb1.gz) 260 Kb
  • Biological Unit Coordinates (6zvg.pdb2.gz) 259 Kb
  • LPC: Ligand-Protein Contacts for 6ZVG
  • CSU: Contacts of Structural Units for 6ZVG
  • Structure Factors (269 Kb)
  • Retrieve 6ZVG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 6ZVG from S2C, [Save to disk]
    • View 6ZVG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 6ZVG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [6zvg_C] [6zvg_A] [6zvg_B] [6zvg_D]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 6ZVG
  • Community annotation for 6ZVG at PDBWiki (http://pdbwiki.org)

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