7ETH Lyase date May 12, 2021
title Crystal Structure Of Abhpai-Zn-Pyruvate-Propionaldehyde Comp II Aldolase, Hpai From Acinetobacter Baumannii
authors P.Watthaisong, A.Binlaeh, A.Jaruwat, P.Chaiyen, P.Chitnumsub, S.M
compound source
Molecule: 4-Hydroxy-2-Oxoheptanedioate Aldolase
Chain: A, B, C
Ec: 4.1.2.52
Engineered: Yes
 Organism_scientific: Acinetobacter Baumannii
Organism_taxid: 470
Gene: Hpai, Fd887_17235
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11a
symmetry Space Group: C 1 2 1
R_factor 0.175 R_Free 0.215
crystal
cell
length a length b length c angle alpha angle beta angle gamma
147.183 89.643 86.312 90.00 122.55 90.00
method X-Ray Diffractionresolution 2.20 Å
ligand CA, CBG, PYR, ZN enzyme Lyase E.C.4.1.2.52 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (124 Kb) [Save to disk]
  • Biological Unit Coordinates (7eth.pdb1.gz) 235 Kb
  • LPC: Ligand-Protein Contacts for 7ETH
  • CSU: Contacts of Structural Units for 7ETH
  • Structure Factors (792 Kb)
  • Retrieve 7ETH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7ETH from S2C, [Save to disk]
    • View 7ETH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 7ETH
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7eth_C] [7eth_B] [7eth_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 7ETH
  • Community annotation for 7ETH at PDBWiki (http://pdbwiki.org)

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