7YY8 Transferase date Feb 17, 2022
title Crystal Structure Of Mycobacterium Abscessus Phosphopantethe Adenylyltransferase In Complex With Fragment 12
authors S.E.Thomas, A.G.Coyne, T.L.Blundell
compound source
Molecule: Phosphopantetheine Adenylyltransferase
Chain: A, B, C
Synonym: Dephospho-Coa Pyrophosphorylase,Pantetheine-Phosph Adenylyltransferase,Ppat;
Ec: 2.7.7.3
Engineered: Yes
 Organism_scientific: Mycobacteroides Abscessus
Organism_taxid: 36809
Gene: Coad, Mab_3259c
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
symmetry Space Group: C 2 2 21
R_factor 0.208 R_Free 0.234
crystal
cell
length a length b length c angle alpha angle beta angle gamma
75.894 125.022 119.163 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.52 Å
ligand 3IL, 4Z9 enzyme Transferase E.C.2.7.7.3 BRENDA
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (83 Kb) [Save to disk]
  • Biological Unit Coordinates (7yy8.pdb1.gz) 154 Kb
  • LPC: Ligand-Protein Contacts for 7YY8
  • CSU: Contacts of Structural Units for 7YY8
  • Structure Factors (5945 Kb)
  • Retrieve 7YY8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 7YY8 from S2C, [Save to disk]
    • View 7YY8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 7YY8
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [7yy8_C] [7yy8_A] [7yy8_B]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 7YY8
  • Community annotation for 7YY8 at PDBWiki (http://pdbwiki.org)

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