Structure based on 1u6o | Ideal structure |
|
Name: (2s,3s)-n6-(2,3,4-trihydroxybutyl)-2'-deoxyadenosine mono phosphoric acid |
Formula: C14 H22 N5 O9 P |
Weight: 435.326 |
SMILES: "OC[CH](O)[CH](O)CNc1ncnc2n(cnc12)[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3" |
Spacial conformation based on PDB
1u6o. Also present on 1u6c |
RESIDUE 2BU 51
CONECT P 4 OP1 OP2 OP3 O5'
CONECT OP1 1 P
CONECT OP2 2 P HOP2
CONECT OP3 2 P HOP3
CONECT O5' 2 P C5'
CONECT C5' 4 O5' C4' H5' H5''
CONECT C4' 4 C5' O4' C3' H4'
CONECT O4' 2 C4' C1'
CONECT C1' 4 O4' N9 C2' H1'
CONECT N9 3 C1' C4 C8
CONECT C4 3 N9 N3 C5
CONECT N3 2 C4 C2
CONECT C2 3 N3 N1 H2
CONECT N1 2 C2 C6
CONECT C6 3 N1 N6 C5
CONECT N6 3 C6 CB1 H6
CONECT CB1 4 N6 CB2 HB12 HB11
CONECT CB2 4 CB1 OH2 CB3 HB2
CONECT OH2 2 CB2 HO2
CONECT CB3 4 CB2 OH3 CB4 HB3
CONECT OH3 2 CB3 HO3
CONECT CB4 4 CB3 OH4 HB41 HB42
CONECT OH4 2 CB4 HO4
CONECT C5 3 C4 C6 N7
CONECT N7 2 C5 C8
CONECT C8 3 N9 N7 H8
CONECT C2' 4 C1' C3' H2' H2''
CONECT C3' 4 C4' C2' O3' H3'
CONECT O3' 2 C3' HO3'
CONECT HOP2 1 OP2
CONECT HOP3 1 OP3
CONECT H5' 1 C5'
CONECT H5'' 1 C5'
CONECT H4' 1 C4'
CONECT H1' 1 C1'
CONECT H2 1 C2
CONECT H6 1 N6
CONECT HB12 1 CB1
CONECT HB11 1 CB1
CONECT HB2 1 CB2
CONECT HO2 1 OH2
CONECT HB3 1 CB3
CONECT HO3 1 OH3
CONECT HB41 1 CB4
CONECT HB42 1 CB4
CONECT HO4 1 OH4
CONECT H8 1 C8
CONECT H2' 1 C2'
CONECT H2'' 1 C2'
CONECT H3' 1 C3'
CONECT HO3' 1 O3'
END
HET 2BU 51
HETNAM 2BU (2S,3S)-N6-(2,3,4-TRIHYDROXYBUTYL)-2'-DEOXYADENOSINE MO
HETNAM 2 2BU NO PHOSPHORIC ACID
FORMUL 2BU C14 H22 N5 O9 P1