Structure based on 2c2t |
Ideal structure |
|
| Name: (r)-2,4-diamino-5-((7,8-dicarbaundecaboran-7-yl)methyl)-6-methylpyrimidine |
| Formula: C8 H20 B9 N4 |
| Weight: 269.570 |
| SMILES: "Cc1nc(N)nc(N)c1C[C+]234[BH-]5[BH]267[BH]389[CH]4%10[BH2]%11[BH]%12%13%14[BH2-][BH+]56%12[BH]78%13[BH]9%10%11%14" |
| Spacial conformation based on PDB
2c2t |
RESIDUE 39E 41
CONECT N1 2 C2 C6
CONECT C2 3 N1 N3 N2'
CONECT N3 2 C2 C4
CONECT C4 3 N3 C5 N4'
CONECT C5 3 C4 C6 C5'
CONECT C6 3 N1 C5 C6'
CONECT N2' 3 C2 H2'1 HA2
CONECT N4' 3 C4 HA1 HB2
CONECT C6' 4 C6 HC1 HD2 HE3
CONECT C5' 4 C5 C1C HB1 HC2
CONECT C1C 5 C5' C2C B4 B5
CONECT C1C 5 B6
CONECT C2C 5 C1C B6 B7 B8
CONECT C2C 5 H2C
CONECT B4 4 C1C B5 B10 HB4
CONECT B5 6 C1C B4 B6 B10
CONECT B5 6 B11 HB5
CONECT B6 6 C1C C2C B5 B7
CONECT B6 6 B11 HB6
CONECT B7 6 C2C B6 B8 B11
CONECT B7 6 B12 HB7
CONECT B8 5 C2C B7 B12 HB9
CONECT B8 5 HB8
CONECT B9 4 B10 B12 HB9 HB9A
CONECT B10 6 B4 B5 B9 B11
CONECT B10 6 B12 HB10
CONECT B11 6 B5 B6 B7 B10
CONECT B11 6 B12 HB11
CONECT B12 6 B7 B8 B9 B10
CONECT B12 6 B11 HB12
CONECT H2'1 1 N2'
CONECT HA2 1 N2'
CONECT HA1 1 N4'
CONECT HB2 1 N4'
CONECT HB1 1 C5'
CONECT HC2 1 C5'
CONECT HC1 1 C6'
CONECT HD2 1 C6'
CONECT HE3 1 C6'
CONECT HB4 1 B4
CONECT HB5 1 B5
CONECT HB6 1 B6
CONECT HB7 1 B7
CONECT HB9 2 B8 B9
CONECT HB10 1 B10
CONECT H2C 1 C2C
CONECT HB8 1 B8
CONECT HB9A 1 B9
CONECT HB11 1 B11
CONECT HB12 1 B12
END
HET 39E 41
HETNAM 39E (R)-2,4-DIAMINO-5-((7,8-DICARBAUNDECABORAN-7-YL)METHYL)
HETNAM 2 39E -6-METHYLPYRIMIDINE
FORMUL 39E C8 H20 B9 N4
MONOMER page