Structure based on 2bpy

Ideal structure
Name: n-[2(s)-cyclopentyl-1(r)-hydroxy-3(r)methyl]-5-[(2(s)-tertiary-butylamino-carbonyl)-4-(n1-(2)-(n-methylpiperazinyl)-3-chloro-pyrazinyl-5-carbonyl)-piperazino]-4(s)-hydroxy-2(r)-phenylmethyl-pentanamide
Formula: C37 H55 Cl N8 O5
Weight: 727.336
SMILES: "C[CH]1CC[CH](O)[CH]1NC(=O)[CH](C[CH](O)CN2CCN(C[CH]2C(=O)NC(C)(C)C)C(=O)c3cnc(N4CCN(C)CC4)c(Cl)n3)Cc5ccccc5"
Spacial conformation based on PDB 2bpy.
Also present on 1c6x, 2bpz
RESIDUE   3IN    106
CONECT      C1     4 C2   N1   H11A H12 
CONECT      C2     4 C1   C3   N3   H2  
CONECT      C3     3 C2   O1   N2  
CONECT      O4     2 C23  HO4 
CONECT      O5     1 C31 
CONECT      N6     2 C32  C33 
CONECT      C7     4 C4   H71  H72  H73 
CONECT      C8     4 C9   N3   H81  H82 
CONECT      C9     4 C8   N1   H91  H92 
CONECT      C10    4 C11  N3   H101 H102
CONECT      C11    4 C10  C12  O2   H11 
CONECT      C12    4 C11  C13  H121 H122
CONECT      C13    4 C12  C14  C21  H13 
CONECT      C14    4 C13  C15  H141 H142
CONECT      C15    3 C14  C16  C20 
CONECT      C16    3 C15  C17  H16 
CONECT      C19    3 C20  C18  H19 
CONECT      C20    3 C15  C19  H20 
CONECT      C21    3 C13  O3   N4  
CONECT      C22    4 C30  N4   C23  H22 
CONECT      C24    4 C23  C25  H241 H242
CONECT      C27    4 C26  N8   H271 H272
CONECT      C30    4 C22  C25  C29  H30 
CONECT      C31    3 O5   C32  N1  
CONECT      C32    3 N6   C31  C36 
CONECT      C33    3 N6   C34  CL1 
CONECT      C34    3 C33  N7   N5  
CONECT      C35    4 N8   C37  H351 H352
CONECT      N1     3 C1   C9   C31 
CONECT      O1     1 C3  
CONECT      N2     3 C3   C4   HN2 
CONECT      C4     4 C7   N2   C5   C6  
CONECT      C5     4 C4   H51  H52  H53 
CONECT      C6     4 C4   H61  H62  H63 
CONECT      N3     3 C2   C8   C10 
CONECT      O2     2 C11  HO2 
CONECT      C17    3 C16  C18  H17 
CONECT      C18    3 C19  C17  H18 
CONECT      O3     1 C21 
CONECT      N4     3 C21  C22  HN4 
CONECT      C23    4 O4   C22  C24  H23 
CONECT      C25    4 C24  C30  H251 H252
CONECT      C29    4 C30  H291 H292 H293
CONECT      N7     2 C34  C36 
CONECT      C36    3 C32  N7   H36 
CONECT      CL1    1 C33 
CONECT      C26    4 C27  N5   H261 H262
CONECT      N8     3 C27  C35  C28 
CONECT      C37    4 C35  N5   H371 H372
CONECT      N5     3 C34  C26  C37 
CONECT      C28    4 N8   H281 H282 H283
CONECT      H11A   1 C1  
CONECT      H12    1 C1  
CONECT      H2     1 C2  
CONECT      HO4    1 O4  
CONECT      H71    1 C7  
CONECT      H72    1 C7  
CONECT      H73    1 C7  
CONECT      H81    1 C8  
CONECT      H82    1 C8  
CONECT      H91    1 C9  
CONECT      H92    1 C9  
CONECT      H101   1 C10 
CONECT      H102   1 C10 
CONECT      H11    1 C11 
CONECT      H121   1 C12 
CONECT      H122   1 C12 
CONECT      H13    1 C13 
CONECT      H141   1 C14 
CONECT      H142   1 C14 
CONECT      H16    1 C16 
CONECT      H19    1 C19 
CONECT      H20    1 C20 
CONECT      H22    1 C22 
CONECT      H241   1 C24 
CONECT      H242   1 C24 
CONECT      H271   1 C27 
CONECT      H272   1 C27 
CONECT      H30    1 C30 
CONECT      H351   1 C35 
CONECT      H352   1 C35 
CONECT      HN2    1 N2  
CONECT      H51    1 C5  
CONECT      H52    1 C5  
CONECT      H53    1 C5  
CONECT      H61    1 C6  
CONECT      H62    1 C6  
CONECT      H63    1 C6  
CONECT      HO2    1 O2  
CONECT      H17    1 C17 
CONECT      H18    1 C18 
CONECT      HN4    1 N4  
CONECT      H23    1 C23 
CONECT      H251   1 C25 
CONECT      H252   1 C25 
CONECT      H291   1 C29 
CONECT      H292   1 C29 
CONECT      H293   1 C29 
CONECT      H36    1 C36 
CONECT      H261   1 C26 
CONECT      H262   1 C26 
CONECT      H371   1 C37 
CONECT      H372   1 C37 
CONECT      H281   1 C28 
CONECT      H282   1 C28 
CONECT      H283   1 C28 
END   
HET    3IN            106
HETNAM     3IN N-[2(S)-CYCLOPENTYL-1(R)-HYDROXY-3(R)METHYL]-5-[(2(S)-T
HETNAM   2 3IN ERTIARY-BUTYLAMINO-CARBONYL)-4-(N1-(2)-(N-METHYLPIPERAZ
HETNAM   3 3IN INYL)-3-CHLORO-PYRAZINYL-5-CARBONYL)-PIPERAZINO]-4(S)-H
HETNAM   4 3IN YDROXY-2(R)-PHENYLMETHYL-PENTANAMIDE
FORMUL      3IN    C37 H55 Cl1 N8 O5

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uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science