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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014 Bioinformatics Unit Weizmann Institute of Science |
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| Name: (6r)-3-(2-deoxy-5-o-phosphono-beta-d-erythro-pentofuranosyl)-6-hydroxy-5,6,7,8-tetrahydropyrimido[1,2-a]purin-10(3h)-one | ||
| Formula: C13 H18 N5 O8 P | ||
| Weight: 403.284 | ||
| SMILES: "O[CH]1CCN2C(=O)c3ncn([CH]4C[CH](O)[CH](CO[P](O)(O)=O)O4)c3N=C2N1" | ||
| Spacial conformation based on PDB
2kda. Also present on 2lsz |
RESIDUE 63H 45 CONECT O3P 2 P HO3P CONECT C1' 4 C2' N9 O4' H1' CONECT C10 4 C11 N2 O10 H10 CONECT C11 4 C10 C12 H11 H11A CONECT C12 4 C11 N1 H12 H12A CONECT C2 3 N1 N2 N3 CONECT C2' 4 C1' C3' H2' H2'A CONECT C3' 4 C2' C4' O3' H3' CONECT C4 3 C5 N3 N9 CONECT C4' 4 C3' C5' O4' H4' CONECT C5 3 C4 C6 N7 CONECT C5' 4 C4' O5' H5' H5'' CONECT C6 3 C5 N1 O6 CONECT C8 3 N7 N9 H8 CONECT N1 3 C12 C2 C6 CONECT N2 3 C10 C2 HN2 CONECT N3 2 C2 C4 CONECT N7 2 C5 C8 CONECT N9 3 C1' C4 C8 CONECT O10 2 C10 HO10 CONECT O1P 2 P HO1P CONECT O2P 1 P CONECT O3' 2 C3' HO3' CONECT O4' 2 C1' C4' CONECT O5' 2 C5' P CONECT O6 1 C6 CONECT P 4 O3P O1P O2P O5' CONECT H1' 1 C1' CONECT H10 1 C10 CONECT HO10 1 O10 CONECT H11 1 C11 CONECT H11A 1 C11 CONECT H12 1 C12 CONECT H12A 1 C12 CONECT HN2 1 N2 CONECT H2' 1 C2' CONECT H2'A 1 C2' CONECT H3' 1 C3' CONECT H4' 1 C4' CONECT H5' 1 C5' CONECT H5'' 1 C5' CONECT H8 1 C8 CONECT HO3P 1 O3P CONECT HO1P 1 O1P CONECT HO3' 1 O3' END HET 63H 45 HETNAM 63H (6R)-3-(2-deoxy-5-O-phosphono-beta-D-erythro-pentofuran HETNAM 2 63H osyl)-6-hydroxy-5,6,7,8-tetrahydropyrimido[1,2-a]purin- HETNAM 3 63H 10(3H)-one FORMUL 63H C13 H18 N5 O8 P1
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This OCA
MONOMER page uses Jmol, developed by the Jmol Development Team (color reference)
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