Structure based on 5p9j

Ideal structure
Name: 1-[(3~{r})-3-[4-azanyl-3-(4-phenoxyphenyl)pyrazolo[3,4-d]pyrimidin-1-yl]piperidin-1-yl]propan-1-one
Formula: C25 H26 N6 O2
Weight: 442.513
SMILES: "CCC(=O)N1CCC[CH](C1)n2nc(c3ccc(Oc4ccccc4)cc3)c5c(N)ncnc25"
Spacial conformation based on PDB 5p9j.
Also present on 6yg2
RESIDUE   8E8     59
CONECT      N1     2 C2   C6  
CONECT      C2     3 N1   N3   H1  
CONECT      N3     2 C2   C4  
CONECT      C4     3 N3   C5   NBF 
CONECT      C5     3 C4   C6   CBB 
CONECT      C6     3 N1   C5   NAB 
CONECT      CAA    4 CAD  H2   H3   H4  
CONECT      NAB    3 C6   H5   H6  
CONECT      OAC    1 CAW 
CONECT      CAD    4 CAA  CAW  H7   H8  
CONECT      CAE    3 CAF  CAG  H9  
CONECT      CAF    3 CAE  CAI  H10 
CONECT      CAG    3 CAE  CAJ  H11 
CONECT      CAI    3 CAF  CAY  H12 
CONECT      CAJ    3 CAG  CAY  H13 
CONECT      CAK    3 CAM  CAZ  H14 
CONECT      CAL    3 CAN  CAZ  H15 
CONECT      CAM    3 CAK  CBA  H16 
CONECT      CAN    3 CAL  CBA  H17 
CONECT      CAO    4 CAP  CAQ  H18  H19 
CONECT      CAP    4 CAO  CBE  H20  H21 
CONECT      CAQ    4 CAO  NBG  H22  H23 
CONECT      CAR    4 CBE  NBG  H24  H25 
CONECT      NAU    2 CBB  NBF 
CONECT      OAV    2 CAY  CAZ 
CONECT      CAW    3 OAC  CAD  NBG 
CONECT      CAY    3 CAI  CAJ  OAV 
CONECT      CAZ    3 CAK  CAL  OAV 
CONECT      CBA    3 CAM  CAN  CBB 
CONECT      CBB    3 C5   NAU  CBA 
CONECT      CBE    4 CAP  CAR  NBF  H26 
CONECT      NBF    3 C4   NAU  CBE 
CONECT      NBG    3 CAQ  CAR  CAW 
CONECT      H1     1 C2  
CONECT      H2     1 CAA 
CONECT      H3     1 CAA 
CONECT      H4     1 CAA 
CONECT      H5     1 NAB 
CONECT      H6     1 NAB 
CONECT      H7     1 CAD 
CONECT      H8     1 CAD 
CONECT      H9     1 CAE 
CONECT      H10    1 CAF 
CONECT      H11    1 CAG 
CONECT      H12    1 CAI 
CONECT      H13    1 CAJ 
CONECT      H14    1 CAK 
CONECT      H15    1 CAL 
CONECT      H16    1 CAM 
CONECT      H17    1 CAN 
CONECT      H18    1 CAO 
CONECT      H19    1 CAO 
CONECT      H20    1 CAP 
CONECT      H21    1 CAP 
CONECT      H22    1 CAQ 
CONECT      H23    1 CAQ 
CONECT      H24    1 CAR 
CONECT      H25    1 CAR 
CONECT      H26    1 CBE 
END   
HET    8E8             59
HETSYN     8E8 Ibrutinib (bound form)
HETNAM     8E8 1-[(3~{R})-3-[4-azanyl-3-(4-phenoxyphenyl)pyrazolo[3,4-
HETNAM   2 8E8 d]pyrimidin-1-yl]piperidin-1-yl]propan-1-one
FORMUL      8E8    C25 H26 N6 O2

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science