Structure based on 1mht

Ideal structure
Name: 5-methyl-5-fluoro-2'-deoxy-cytidine-5'-monophosphate
Formula: C10 H17 F N3 O8 P
Weight: 357.229
SMILES: "NC1=NC(=O)N(C[C]1(F)CO)[CH]2C[CH](O)[CH](CO[P](O)(O)=O)O2"
Spacial conformation based on PDB 1mht
RESIDUE   C36     40
CONECT      OXT    2 C    HXT 
CONECT      O3P    2 P    H3P 
CONECT      P      4 O3P  O1P  O2P  O5' 
CONECT      O1P    1 P   
CONECT      O2P    2 P    H2P 
CONECT      O5'    2 P    C5' 
CONECT      C5'    4 O5'  C4'  H5'1 H5'2
CONECT      C4'    4 C5'  O4'  C3'  H4' 
CONECT      O4'    2 C4'  C1' 
CONECT      C3'    4 C4'  O3'  C2'  H3' 
CONECT      O3'    2 C3'  HA  
CONECT      C2'    4 C3'  C1'  H2'1 H2'2
CONECT      C1'    4 O4'  C2'  N1   H1' 
CONECT      N1     3 C1'  C2   C6  
CONECT      C2     3 N1   O2   N3  
CONECT      O2     1 C2  
CONECT      N3     2 C2   C4  
CONECT      C4     3 N3   N4   C5  
CONECT      N4     3 C4   H4N1 H4N2
CONECT      C5     4 C4   C6   F    C   
CONECT      C6     4 N1   C5   H6   HC2 
CONECT      F      1 C5  
CONECT      C      4 OXT  C5   HC1  HC3 
CONECT      HXT    1 OXT 
CONECT      H3P    1 O3P 
CONECT      H2P    1 O2P 
CONECT      H5'1   1 C5' 
CONECT      H5'2   1 C5' 
CONECT      H4'    1 C4' 
CONECT      H3'    1 C3' 
CONECT      HA     1 O3' 
CONECT      H2'1   1 C2' 
CONECT      H2'2   1 C2' 
CONECT      H1'    1 C1' 
CONECT      H4N1   1 N4  
CONECT      H4N2   1 N4  
CONECT      H6     1 C6  
CONECT      HC1    1 C   
CONECT      HC2    1 C6  
CONECT      HC3    1 C   
END   
HET    C36             40
HETNAM     C36 5-METHYL-5-FLUORO-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE
FORMUL      C36    C10 H17 F1 N3 O8 P1

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science