Structure based on 3fba |
Ideal structure |
|
| Name: [(2s,3s,4r,5s)-5-(4-amino-2-oxo-pyrimidin-1-yl)-4-hydroxy-2-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphate |
| Formula: C9 H14 N3 O8 P |
| Weight: 323.197 |
| SMILES: "NC1=NC(=O)N(C=C1)[CH]2O[CH](CO)[CH](O[P](O)(O)=O)[CH]2O" |
| Spacial conformation based on PDB
3fba |
RESIDUE C6B 35
CONECT O1P 2 P HO1P
CONECT P 4 O1P O2P O3P O3'
CONECT O2P 2 P HO2P
CONECT O3P 1 P
CONECT O3' 2 P C3'
CONECT C3' 4 O3' C2' C4' H3'
CONECT C2' 4 C3' O2' C1' H2'
CONECT O2' 2 C2' HO2'
CONECT C4' 4 C3' C5' O4' H4'
CONECT C5' 4 C4' O5' H5' H5'A
CONECT O5' 2 C5' HO5'
CONECT O4' 2 C4' C1'
CONECT C1' 4 C2' O4' N1 H1'
CONECT N1 3 C1' C6 C2
CONECT C6 3 N1 C5 H6
CONECT C5 3 C6 C4 H5
CONECT C4 3 C5 N4 N3
CONECT N4 3 C4 HN4 HN4A
CONECT N3 2 C4 C2
CONECT C2 3 N1 N3 O2
CONECT O2 1 C2
CONECT HO1P 1 O1P
CONECT HO2P 1 O2P
CONECT H3' 1 C3'
CONECT H2' 1 C2'
CONECT HO2' 1 O2'
CONECT H4' 1 C4'
CONECT H5' 1 C5'
CONECT H5'A 1 C5'
CONECT HO5' 1 O5'
CONECT H1' 1 C1'
CONECT H6 1 C6
CONECT H5 1 C5
CONECT HN4 1 N4
CONECT HN4A 1 N4
END
HET C6B 35
HETNAM C6B [(2S,3S,4R,5S)-5-(4-amino-2-oxo-pyrimidin-1-yl)-4-hydro
HETNAM 2 C6B xy-2-(hydroxymethyl)oxolan-3-yl] dihydrogen phosphate
FORMUL C6B C9 H14 N3 O8 P1
MONOMER page