Hetgroup: CSL

Structure based on 1yls

Ideal structure

Name: (d)-2'-methylselenyl-2'-deoxycytidine-5'-phosphate

Formula: C10 H16 N3 O7 P Se

Weight: 400.184

SMILES: "C[Se][CH]1[CH](O)[CH](CO[P](O)(O)=O)O[CH]1N2C=CC(=NC2=O)N"

Spacial conformation based on PDB 1yls.
Also present on 4ys5, 6d4l, 6d54, 6qiq

RESIDUE   CSL     38
CONECT      P      4 O2P  O1P  O5'  O3P 
CONECT      O2P    2 P    HOP2
CONECT      O1P    1 P   
CONECT      O5'    2 P    C5' 
CONECT      C5'    4 O5'  C4'  H5'1 H5'2
CONECT      C4'    4 C5'  O4'  C3'  H4' 
CONECT      O4'    2 C4'  C1' 
CONECT      C1'    4 O4'  N1   C2'  H1' 
CONECT      N1     3 C1'  C2   C6  
CONECT      C2     3 N1   O2   N3  
CONECT      O2     1 C2  
CONECT      N3     2 C2   C4  
CONECT      C4     3 N3   N4   C5  
CONECT      N4     3 C4   HN41 HN42
CONECT      C5     3 C4   C6   H5  
CONECT      C6     3 N1   C5   H6  
CONECT      C2'    4 C1'  SE2' C3'  H2' 
CONECT      SE2'   2 C2'  CA' 
CONECT      CA'    4 SE2' HA'1 HA'2 HA'3
CONECT      C3'    4 C4'  C2'  O3'  H3' 
CONECT      O3'    2 C3'  H3T 
CONECT      O3P    2 P    HOP3
CONECT      HOP2   1 O2P 
CONECT      H5'1   1 C5' 
CONECT      H5'2   1 C5' 
CONECT      H4'    1 C4' 
CONECT      H1'    1 C1' 
CONECT      HN41   1 N4  
CONECT      HN42   1 N4  
CONECT      H5     1 C5  
CONECT      H6     1 C6  
CONECT      H2'    1 C2' 
CONECT      HA'1   1 CA' 
CONECT      HA'2   1 CA' 
CONECT      HA'3   1 CA' 
CONECT      H3'    1 C3' 
CONECT      H3T    1 O3' 
CONECT      HOP3   1 O3P 
END   
HET    CSL             38
HETSYN     CSL (D)-2'-DEOXY-2'-SE-METHYLCYTIDINE-5'-PHOSPHATE
HETNAM     CSL (D)-2'-METHYLSELENYL-2'-DEOXYCYTIDINE-5'-PHOSPHATE
FORMUL      CSL    C10 H16 N3 O7 P1 Se1

This OCA

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