MONOMER pageuses Jmol, developed by the Jmol Development Team (color reference)
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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014 Bioinformatics Unit Weizmann Institute of Science |
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| Name: 2'-deoxy-5'-o-{(r)-hydroxy[(2-sulfanylethyl)amino]phosphoryl}cytidine | ||
| Formula: C11 H19 N4 O6 P S | ||
| Weight: 366.331 | ||
| SMILES: "NC1=NC(=O)N(C=C1)[CH]2C[CH](O)[CH](CO[P](O)(=O)NCCS)O2" | ||
| Spacial conformation based on PDB
3jy2. Also present in other 7 PDB entries. |
RESIDUE CX2 42
CONECT P 4 N4' O5' OP1 OP3
CONECT S 2 C8' HS
CONECT N1 3 C2 C6 C1'
CONECT C2 3 N1 O2 N3
CONECT O2 1 C2
CONECT N3 2 C2 C4
CONECT C4 3 N3 N4 C5
CONECT N4 3 C4 HN4 HN4A
CONECT C5 3 C4 C6 H5
CONECT C6 3 N1 C5 H6
CONECT C1' 4 N1 C2' O4' H1'
CONECT C2' 4 C1' C3' H2' H2'A
CONECT C3' 4 C2' O3' C4' H3'
CONECT O3' 2 C3' HO3'
CONECT C4' 4 C3' O4' C5' H4'
CONECT N4' 3 P C7' HN4'
CONECT O4' 2 C1' C4'
CONECT C5' 4 C4' O5' H5' H5'A
CONECT O5' 2 P C5'
CONECT C7' 4 N4' C8' H7' H7'A
CONECT C8' 4 S C7' H8' H8'A
CONECT OP1 1 P
CONECT HS 1 S
CONECT HN4 1 N4
CONECT HN4A 1 N4
CONECT H5 1 C5
CONECT H6 1 C6
CONECT H1' 1 C1'
CONECT H2' 1 C2'
CONECT H2'A 1 C2'
CONECT H3' 1 C3'
CONECT HO3' 1 O3'
CONECT H4' 1 C4'
CONECT HN4' 1 N4'
CONECT H5' 1 C5'
CONECT H5'A 1 C5'
CONECT H7' 1 C7'
CONECT H7'A 1 C7'
CONECT H8' 1 C8'
CONECT H8'A 1 C8'
CONECT OP3 2 P HOP3
CONECT HOP3 1 OP3
END
HET CX2 42
HETNAM CX2 2'-deoxy-5'-O-{(R)-hydroxy[(2-sulfanylethyl)amino]phosp
HETNAM 2 CX2 horyl}cytidine
FORMUL CX2 C11 H19 N4 O6 P1 S1
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This OCA
MONOMER page uses Jmol, developed by the Jmol Development Team (color reference)
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