Structure based on 288d

Ideal structure
Name: 2'-bromo-4'-epidaunorubicin
Formula: C27 H28 Br N O10
Weight: 606.416
SMILES: "COc1cccc2C(=O)c3c(O)c4C[C](O)(C[CH](O[CH]5O[CH](C)[CH](O)[CH](N)[CH]5Br)c4c(O)c3C(=O)c12)C(C)=O"
Spacial conformation based on PDB 288d.
Also present in other 5 PDB entries.
RESIDUE   DM8     67
CONECT      C1     3 C2   C15  H1  
CONECT      C2     3 C1   C3   H2  
CONECT      C3     3 C2   C4   H3  
CONECT      C4     3 C3   C16  O4  
CONECT      C5     3 C16  C17  O5  
CONECT      C6     3 C17  C20  O6  
CONECT      C7     4 C8   C20  O7   H7  
CONECT      C8     4 C7   C9   H81  H82 
CONECT      C9     4 C8   C10  C13  O9  
CONECT      C10    4 C9   C19  H101 H102
CONECT      C11    3 C18  C19  O11 
CONECT      C12    3 C15  C18  O12 
CONECT      C13    3 C9   C14  O13 
CONECT      C14    4 C13  H141 H142 H143
CONECT      C15    3 C1   C12  C16 
CONECT      C16    3 C4   C5   C15 
CONECT      C17    3 C5   C6   C18 
CONECT      C18    3 C11  C12  C17 
CONECT      C19    3 C10  C11  C20 
CONECT      C20    3 C6   C7   C19 
CONECT      C21    4 O4   H211 H212 H213
CONECT      O4     2 C4   C21 
CONECT      O5     1 C5  
CONECT      O6     2 C6   H6  
CONECT      O7     2 C7   C1' 
CONECT      O9     2 C9   H9  
CONECT      O11    2 C11  H11 
CONECT      O12    1 C12 
CONECT      O13    1 C13 
CONECT      C1'    4 O7   C2'  O5'  H1' 
CONECT      C2'    4 C1'  C3'  BR   H2' 
CONECT      C3'    4 C2'  C4'  N3'  H3' 
CONECT      C4'    4 C3'  C5'  O4'  H4' 
CONECT      C5'    4 C4'  C6'  O5'  H5' 
CONECT      C6'    4 C5'  H6'1 H6'2 H6'3
CONECT      O5'    2 C1'  C5' 
CONECT      O4'    2 C4'  HO4'
CONECT      N3'    3 C3'  HN'1 HN'2
CONECT      BR     1 C2' 
CONECT      H1     1 C1  
CONECT      H2     1 C2  
CONECT      H3     1 C3  
CONECT      H7     1 C7  
CONECT      H81    1 C8  
CONECT      H82    1 C8  
CONECT      H101   1 C10 
CONECT      H102   1 C10 
CONECT      H141   1 C14 
CONECT      H142   1 C14 
CONECT      H143   1 C14 
CONECT      H211   1 C21 
CONECT      H212   1 C21 
CONECT      H213   1 C21 
CONECT      H6     1 O6  
CONECT      H9     1 O9  
CONECT      H11    1 O11 
CONECT      H1'    1 C1' 
CONECT      H2'    1 C2' 
CONECT      H3'    1 C3' 
CONECT      H4'    1 C4' 
CONECT      H5'    1 C5' 
CONECT      H6'1   1 C6' 
CONECT      H6'2   1 C6' 
CONECT      H6'3   1 C6' 
CONECT      HO4'   1 O4' 
CONECT      HN'1   1 N3' 
CONECT      HN'2   1 N3' 
END   
HET    DM8             67
HETSYN     DM8 WP401; DAUNOMYCIN DERIVATIVE; DAUNORUBICIN DERIVATIVE
HETNAM     DM8 2'-BROMO-4'-EPIDAUNORUBICIN
FORMUL      DM8    C27 H28 Br1 N1 O10

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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science