Structure based on 2z65

Ideal structure
Name: 3-o-decyl-2-deoxy-6-o-{2-deoxy-3-o-[(3r)-3-methoxydecyl]-6-o-methyl-2-[(11z)-octadec-11-enoylamino]-4-o-phosphono-beta-d-glucopyranosyl}-2-[(3-oxotetradecanoyl)amino]-1-o-phosphono-alpha-d-glucopyranose
Formula: C66 H126 N2 O19 P2
Weight: 1313.656
SMILES: "CCCCCCCCCCCC(=O)CC(=O)N[CH]1[CH](O[CH](CO[CH]2O[CH](COC)[CH](O[P](O)(O)=O)[CH](OCC[CH](CCCCCCC)OC)[CH]2NC(=O)CCCCCCCCCC=CCCCCCC)[CH](O)[CH]1OCCCCCCCCCC)O[P](O)(O)=O"
Spacial conformation based on PDB 2z65.
Also present on 3ula
RESIDUE   E55    215
CONECT      CAB    4 CAT  HAB1 HAB2 HAB3
CONECT      CAT    4 CAB  CAZ  HAT1 HAT2
CONECT      CAZ    4 CAT  CBF  HAZ1 HAZ2
CONECT      CBF    4 CAZ  CBJ  HBF1 HBF2
CONECT      CBJ    4 CBF  CBM  HBJ1 HBJ2
CONECT      CBM    4 CBJ  CBP  HBM1 HBM2
CONECT      CBP    4 CBM  CBR  HBP1 HBP2
CONECT      CBR    4 CBP  CBU  HBR1 HBR2
CONECT      CBU    4 CBR  CBY  HBU1 HBU2
CONECT      CBY    4 CBU  CCD  HBY1 HBY2
CONECT      CCD    4 CBY  CCV  HCD1 HCD2
CONECT      CCV    3 CCD  OAG  CCH 
CONECT      OAG    1 CCV 
CONECT      CCH    4 CCV  CCX  HCH1 HCH2
CONECT      CCX    3 CCH  OAI  N2  
CONECT      OAI    1 CCX 
CONECT      N2     3 CCX  C2   HN2 
CONECT      C2     4 N2   C3   C1   H2  
CONECT      C3     4 C2   C4   O3   H3  
CONECT      C4     4 C3   O4   C5   H4  
CONECT      O4     2 C4   HO4 
CONECT      O3     2 C3   CCB 
CONECT      CCB    4 O3   CBX  HCB1 HCB2
CONECT      CBX    4 CCB  CBT  HBX1 HBX2
CONECT      CBT    4 CBX  CBQ  HBT1 HBT2
CONECT      CBQ    4 CBT  CBN  HBQ1 HBQ2
CONECT      CBN    4 CBQ  CBK  HBN1 HBN2
CONECT      CBK    4 CBN  CBG  HBK1 HBK2
CONECT      CBG    4 CBK  CBA  HBG1 HBG2
CONECT      CBA    4 CBG  CAU  HBA1 HBA2
CONECT      CAU    4 CBA  CAC  HAU1 HAU2
CONECT      CAC    4 CAU  HAC1 HAC2 HAC3
CONECT      C1     4 C2   O1   O5   H1  
CONECT      O1     2 C1   PDJ 
CONECT      PDJ    4 O1   OAM  OAN  OAJ 
CONECT      OAM    2 PDJ  HAM 
CONECT      OAN    2 PDJ  HAN 
CONECT      OAJ    1 PDJ 
CONECT      O5     2 C1   C5  
CONECT      C5     4 C4   O5   C6   H5  
CONECT      C6     4 C5   O6   H61  H62 
CONECT      O6     2 C6   CDC 
CONECT      CDC    4 O6   OCR  CDE  HDC 
CONECT      OCR    2 CDC  CDB 
CONECT      CDB    4 OCR  CCI  CDI  HDB 
CONECT      CCI    4 CDB  OCM  HCI1 HCI2
CONECT      OCM    2 CCI  CAE 
CONECT      CAE    4 OCM  HAE1 HAE2 HAE3
CONECT      CDI    4 CDB  OCU  CDH  HDI 
CONECT      OCU    2 CDI  PDK 
CONECT      PDK    4 OCU  OAO  OAP  OAK 
CONECT      OAO    2 PDK  HAO 
CONECT      OAP    2 PDK  HAP 
CONECT      OAK    1 PDK 
CONECT      CDH    4 CDI  OCP  CDE  HDH 
CONECT      OCP    2 CDH  CCC 
CONECT      CCC    4 OCP  CCG  HCC1 HCC2
CONECT      CCG    4 CCC  CCY  HCG1 HCG2
CONECT      CCY    4 CCG  OCN  CCF  HCY 
CONECT      OCN    2 CCY  CAF 
CONECT      CAF    4 OCN  HAF1 HAF2 HAF3
CONECT      CCF    4 CCY  CCA  HCF1 HCF2
CONECT      CCA    4 CCF  CBW  HCA1 HCA2
CONECT      CBW    4 CCA  CBH  HBW1 HBW2
CONECT      CBH    4 CBW  CBB  HBH1 HBH2
CONECT      CBB    4 CBH  CAV  HBB1 HBB2
CONECT      CAV    4 CBB  CAD  HAV1 HAV2
CONECT      CAD    4 CAV  HAD1 HAD2 HAD3
CONECT      CDE    4 CDC  CDH  NCK  HDE 
CONECT      NCK    3 CDE  CCW  HCK 
CONECT      CCW    3 NCK  OAH  CCE 
CONECT      OAH    1 CCW 
CONECT      CCE    4 CCW  CBZ  HCE1 HCE2
CONECT      CBZ    4 CCE  CBV  HBZ1 HBZ2
CONECT      CBV    4 CBZ  CBS  HBV1 HBV2
CONECT      CBS    4 CBV  CBO  HBS1 HBS2
CONECT      CBO    4 CBS  CBL  HBO1 HBO2
CONECT      CBL    4 CBO  CBI  HBL1 HBL2
CONECT      CBI    4 CBL  CBD  HBI1 HBI2
CONECT      CBD    4 CBI  CAX  HBD1 HBD2
CONECT      CAX    4 CBD  CAR  HAX1 HAX2
CONECT      CAR    3 CAX  CAQ  HAR 
CONECT      CAQ    3 CAR  CAW  HAQ 
CONECT      CAW    4 CAQ  CBC  HAW1 HAW2
CONECT      CBC    4 CAW  CBE  HBC1 HBC2
CONECT      CBE    4 CBC  CAY  HBE1 HBE2
CONECT      CAY    4 CBE  CAS  HAY1 HAY2
CONECT      CAS    4 CAY  CAA  HAS1 HAS2
CONECT      CAA    4 CAS  HAA1 HAA2 HAA3
CONECT      HAA1   1 CAA 
CONECT      HAA2   1 CAA 
CONECT      HAA3   1 CAA 
CONECT      HAS1   1 CAS 
CONECT      HAS2   1 CAS 
CONECT      HAY1   1 CAY 
CONECT      HAY2   1 CAY 
CONECT      HBE1   1 CBE 
CONECT      HBE2   1 CBE 
CONECT      HBC1   1 CBC 
CONECT      HBC2   1 CBC 
CONECT      HAW1   1 CAW 
CONECT      HAW2   1 CAW 
CONECT      HAQ    1 CAQ 
CONECT      HAR    1 CAR 
CONECT      HAX1   1 CAX 
CONECT      HAX2   1 CAX 
CONECT      HBD1   1 CBD 
CONECT      HBD2   1 CBD 
CONECT      HBI1   1 CBI 
CONECT      HBI2   1 CBI 
CONECT      HBL1   1 CBL 
CONECT      HBL2   1 CBL 
CONECT      HBO1   1 CBO 
CONECT      HBO2   1 CBO 
CONECT      HBS1   1 CBS 
CONECT      HBS2   1 CBS 
CONECT      HBV1   1 CBV 
CONECT      HBV2   1 CBV 
CONECT      HBZ1   1 CBZ 
CONECT      HBZ2   1 CBZ 
CONECT      HCE1   1 CCE 
CONECT      HCE2   1 CCE 
CONECT      HCK    1 NCK 
CONECT      HDE    1 CDE 
CONECT      HDC    1 CDC 
CONECT      H61    1 C6  
CONECT      H62    1 C6  
CONECT      H5     1 C5  
CONECT      H1     1 C1  
CONECT      HAM    1 OAM 
CONECT      HAN    1 OAN 
CONECT      H2     1 C2  
CONECT      HN2    1 N2  
CONECT      HCH1   1 CCH 
CONECT      HCH2   1 CCH 
CONECT      HCD1   1 CCD 
CONECT      HCD2   1 CCD 
CONECT      HBY1   1 CBY 
CONECT      HBY2   1 CBY 
CONECT      HBU1   1 CBU 
CONECT      HBU2   1 CBU 
CONECT      HBR1   1 CBR 
CONECT      HBR2   1 CBR 
CONECT      HBP1   1 CBP 
CONECT      HBP2   1 CBP 
CONECT      HBM1   1 CBM 
CONECT      HBM2   1 CBM 
CONECT      HBJ1   1 CBJ 
CONECT      HBJ2   1 CBJ 
CONECT      HBF1   1 CBF 
CONECT      HBF2   1 CBF 
CONECT      HAZ1   1 CAZ 
CONECT      HAZ2   1 CAZ 
CONECT      HAT1   1 CAT 
CONECT      HAT2   1 CAT 
CONECT      HAB1   1 CAB 
CONECT      HAB2   1 CAB 
CONECT      HAB3   1 CAB 
CONECT      H3     1 C3  
CONECT      HCB1   1 CCB 
CONECT      HCB2   1 CCB 
CONECT      HBX1   1 CBX 
CONECT      HBX2   1 CBX 
CONECT      HBT1   1 CBT 
CONECT      HBT2   1 CBT 
CONECT      HBQ1   1 CBQ 
CONECT      HBQ2   1 CBQ 
CONECT      HBN1   1 CBN 
CONECT      HBN2   1 CBN 
CONECT      HBK1   1 CBK 
CONECT      HBK2   1 CBK 
CONECT      HBG1   1 CBG 
CONECT      HBG2   1 CBG 
CONECT      HBA1   1 CBA 
CONECT      HBA2   1 CBA 
CONECT      HAU1   1 CAU 
CONECT      HAU2   1 CAU 
CONECT      HAC1   1 CAC 
CONECT      HAC2   1 CAC 
CONECT      HAC3   1 CAC 
CONECT      H4     1 C4  
CONECT      HO4    1 O4  
CONECT      HDB    1 CDB 
CONECT      HCI1   1 CCI 
CONECT      HCI2   1 CCI 
CONECT      HAE1   1 CAE 
CONECT      HAE2   1 CAE 
CONECT      HAE3   1 CAE 
CONECT      HDI    1 CDI 
CONECT      HAO    1 OAO 
CONECT      HAP    1 OAP 
CONECT      HDH    1 CDH 
CONECT      HCC1   1 CCC 
CONECT      HCC2   1 CCC 
CONECT      HCG1   1 CCG 
CONECT      HCG2   1 CCG 
CONECT      HCY    1 CCY 
CONECT      HCF1   1 CCF 
CONECT      HCF2   1 CCF 
CONECT      HCA1   1 CCA 
CONECT      HCA2   1 CCA 
CONECT      HBW1   1 CBW 
CONECT      HBW2   1 CBW 
CONECT      HBH1   1 CBH 
CONECT      HBH2   1 CBH 
CONECT      HBB1   1 CBB 
CONECT      HBB2   1 CBB 
CONECT      HAV1   1 CAV 
CONECT      HAV2   1 CAV 
CONECT      HAD1   1 CAD 
CONECT      HAD2   1 CAD 
CONECT      HAD3   1 CAD 
CONECT      HAF1   1 CAF 
CONECT      HAF2   1 CAF 
CONECT      HAF3   1 CAF 
END   
HET    E55            215
HETSYN     E55 E5564; ERITORAN
HETNAM     E55 3-O-DECYL-2-DEOXY-6-O-{2-DEOXY-3-O-[(3R)-3-METHOXYDECYL
HETNAM   2 E55 ]-6-O-METHYL-2-[(11Z)-OCTADEC-11-ENOYLAMINO]-4-O-PHOSPH
HETNAM   3 E55 ONO-BETA-D-GLUCOPYRANOSYL}-2-[(3-OXOTETRADECANOYL)AMINO
HETNAM   4 E55 ]-1-O-PHOSPHONO-ALPHA-D-GLUCOPYRANOSE
FORMUL      E55    C66 H126 N2 O19 P2

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science