Structure based on 2xno

Ideal structure
Name: 5-{6-[(1-methylpiperidin-4-yl)oxy]-1h-benzimidazol-1-yl}-3-{[2-(trifluoromethyl)benzyl]oxy}thiophene-2-carboxamide
Formula: C26 H25 F3 N4 O3 S
Weight: 530.562
SMILES: "CN1CCC(CC1)Oc2ccc3ncn(c4sc(C(N)=O)c(OCc5ccccc5C(F)(F)F)c4)c3c2"
Spacial conformation based on PDB 2xno
RESIDUE   ED8     62
CONECT      C01    4 N02  H01  H01A H01B
CONECT      N02    3 C01  C03  C37 
CONECT      C03    4 N02  C04  H03  H03A
CONECT      C04    4 C03  C05  H04  H04A
CONECT      C05    4 C04  O06  C36  H05 
CONECT      O06    2 C05  C07 
CONECT      C07    3 O06  C08  C35 
CONECT      C08    3 C07  C09  H08 
CONECT      C09    3 C08  C10  H09 
CONECT      C10    3 C09  N11  C34 
CONECT      N11    2 C10  C12 
CONECT      C12    3 N11  N13  H12 
CONECT      N13    3 C12  C14  C34 
CONECT      C14    3 N13  C15  S33 
CONECT      C15    3 C14  C16  H15 
CONECT      C16    3 C15  O17  C29 
CONECT      O17    2 C16  C18 
CONECT      C18    4 O17  C19  H18  H18A
CONECT      C19    3 C18  C20  C24 
CONECT      C20    3 C19  C21  H20 
CONECT      C21    3 C20  C22  H21 
CONECT      C22    3 C21  C23  H22 
CONECT      C23    3 C22  C24  H23 
CONECT      C24    3 C19  C23  C25 
CONECT      C25    4 C24  F26  F27  F28 
CONECT      F26    1 C25 
CONECT      F27    1 C25 
CONECT      F28    1 C25 
CONECT      C29    3 C16  C30  S33 
CONECT      C30    3 C29  N31  O32 
CONECT      N31    3 C30  HN31 HN3A
CONECT      O32    1 C30 
CONECT      S33    2 C14  C29 
CONECT      C34    3 C10  N13  C35 
CONECT      C35    3 C07  C34  H35 
CONECT      C36    4 C05  C37  H36  H36A
CONECT      C37    4 N02  C36  H37  H37A
CONECT      H01    1 C01 
CONECT      H01A   1 C01 
CONECT      H01B   1 C01 
CONECT      H03    1 C03 
CONECT      H03A   1 C03 
CONECT      H04    1 C04 
CONECT      H04A   1 C04 
CONECT      H05    1 C05 
CONECT      H08    1 C08 
CONECT      H09    1 C09 
CONECT      H12    1 C12 
CONECT      H15    1 C15 
CONECT      H18    1 C18 
CONECT      H18A   1 C18 
CONECT      H20    1 C20 
CONECT      H21    1 C21 
CONECT      H22    1 C22 
CONECT      H23    1 C23 
CONECT      HN31   1 N31 
CONECT      HN3A   1 N31 
CONECT      H35    1 C35 
CONECT      H36    1 C36 
CONECT      H36A   1 C36 
CONECT      H37    1 C37 
CONECT      H37A   1 C37 
END   
HET    ED8             62
HETNAM     ED8 5-{6-[(1-methylpiperidin-4-yl)oxy]-1H-benzimidazol-1-yl
HETNAM   2 ED8 }-3-{[2-(trifluoromethyl)benzyl]oxy}thiophene-2-carboxa
HETNAM   3 ED8 mide
FORMUL      ED8    C26 H25 F3 N4 O3 S1

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science