Structure based on 427d

Ideal structure
Name: n2-methyl-2'-deoxy-guanosine-5'-monophosphate
Formula: C11 H16 N5 O7 P
Weight: 361.248
SMILES: "CNC1=Nc2n(cnc2C(=O)N1)[CH]3C[CH](O)[CH](CO[P](O)(O)=O)O3"
Spacial conformation based on PDB 427d.
Also present in other 6 PDB entries.
RESIDUE   G49     40
CONECT      P      4 O1P  O2P  O3P  O5' 
CONECT      O1P    1 P   
CONECT      O2P    2 P    H2P 
CONECT      O3P    2 P    H3P 
CONECT      O5'    2 P    C5' 
CONECT      C5'    4 O5'  C4'  H5'1 H5'2
CONECT      C4'    4 C5'  O4'  C3'  H4' 
CONECT      O4'    2 C4'  C1' 
CONECT      C3'    4 C4'  O3'  C2'  H3' 
CONECT      O3'    2 C3'  HA  
CONECT      C2'    4 C3'  C1'  H2'1 H2'2
CONECT      C1'    4 O4'  C2'  N9   H1' 
CONECT      N9     3 C1'  C8   C4  
CONECT      C8     3 N9   N7   H8  
CONECT      N7     2 C8   C5  
CONECT      C5     3 N7   C6   C4  
CONECT      C6     3 C5   O6   N1  
CONECT      O6     1 C6  
CONECT      N1     3 C6   C2   H1  
CONECT      C2     3 N1   N2   N3  
CONECT      N2     3 C2   CM2  H2  
CONECT      CM2    4 N2   HM21 HM22 HM23
CONECT      N3     2 C2   C4  
CONECT      C4     3 N9   C5   N3  
CONECT      H2P    1 O2P 
CONECT      H3P    1 O3P 
CONECT      H5'1   1 C5' 
CONECT      H5'2   1 C5' 
CONECT      H4'    1 C4' 
CONECT      H3'    1 C3' 
CONECT      HA     1 O3' 
CONECT      H2'1   1 C2' 
CONECT      H2'2   1 C2' 
CONECT      H1'    1 C1' 
CONECT      H8     1 C8  
CONECT      H1     1 N1  
CONECT      H2     1 N2  
CONECT      HM21   1 CM2 
CONECT      HM22   1 CM2 
CONECT      HM23   1 CM2 
END   
HET    G49             40
HETNAM     G49 N2-METHYL-2'-DEOXY-GUANOSINE-5'-MONOPHOSPHATE
FORMUL      G49    C11 H16 N5 O7 P1

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science