Structure based on 3oa0

Ideal structure
Name: (2s,3s,4r,5r,6r)-5-acetamido-6-[[[(2r,3s,4r,5r)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxy-3,4-dihydroxy-oxane-2-carboxylic acid
Formula: C17 H25 N3 O18 P2
Weight: 621.337
SMILES: "CC(=O)N[CH]1[CH](O)[CH](O)[CH](O[CH]1O[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)N3C=CC(=O)NC3=O)C(O)=O"
Spacial conformation based on PDB 3oa0.
Also present on 3q2i, 3q2k
RESIDUE   HP7     65
CONECT      N1     3 C2   C6   C1C 
CONECT      C2     3 N1   O2   N3  
CONECT      O2     1 C2  
CONECT      N3     3 C2   C4   HN3 
CONECT      C4     3 N3   O4   C5  
CONECT      O4     1 C4  
CONECT      C5     3 C4   C6   H5  
CONECT      C6     3 N1   C5   H6  
CONECT      PA     4 O1A  O2A  O3A  O5C 
CONECT      PB     4 O1B  O2B  O3A  O3B 
CONECT      O'P    1 C6' 
CONECT      O'Q    2 C6'  HO'Q
CONECT      C1'    4 C2'  O3B  O5'  H1' 
CONECT      O1A    1 PA  
CONECT      O1B    1 PB  
CONECT      C1C    4 N1   C2C  O4C  H1C 
CONECT      C2'    4 C1'  N2'  C3'  H2' 
CONECT      N2'    3 C2'  C7'  HN2'
CONECT      O2A    2 PA   HO2A
CONECT      O2B    2 PB   HO2B
CONECT      C2C    4 C1C  O2C  C3C  H2C 
CONECT      O2C    2 C2C  HO2C
CONECT      C3'    4 C2'  O3'  C4'  H3' 
CONECT      O3'    2 C3'  HO3'
CONECT      O3A    2 PA   PB  
CONECT      O3B    2 PB   C1' 
CONECT      C3C    4 C2C  O3C  C4C  H3C 
CONECT      O3C    2 C3C  HO3C
CONECT      C4'    4 C3'  O4'  C5'  H4' 
CONECT      O4'    2 C4'  HO4'
CONECT      C4C    4 C3C  O4C  C5C  H4C 
CONECT      O4C    2 C1C  C4C 
CONECT      C5'    4 C4'  O5'  C6'  H5' 
CONECT      O5'    2 C1'  C5' 
CONECT      C5C    4 C4C  O5C  H5C  H5CA
CONECT      O5C    2 PA   C5C 
CONECT      C6'    3 O'P  O'Q  C5' 
CONECT      C7'    3 N2'  O7'  C8' 
CONECT      O7'    1 C7' 
CONECT      C8'    4 C7'  H8'  H8'A H8'B
CONECT      H5     1 C5  
CONECT      H6     1 C6  
CONECT      HO'Q   1 O'Q 
CONECT      H1'    1 C1' 
CONECT      H1C    1 C1C 
CONECT      H2'    1 C2' 
CONECT      HN2'   1 N2' 
CONECT      HO2A   1 O2A 
CONECT      HO2B   1 O2B 
CONECT      H2C    1 C2C 
CONECT      HO2C   1 O2C 
CONECT      H3'    1 C3' 
CONECT      HO3'   1 O3' 
CONECT      H3C    1 C3C 
CONECT      HO3C   1 O3C 
CONECT      H4'    1 C4' 
CONECT      HO4'   1 O4' 
CONECT      H4C    1 C4C 
CONECT      H5'    1 C5' 
CONECT      H5C    1 C5C 
CONECT      H5CA   1 C5C 
CONECT      H8'    1 C8' 
CONECT      H8'A   1 C8' 
CONECT      H8'B   1 C8' 
CONECT      HN3    1 N3  
END   
HET    HP7             65
HETNAM     HP7 (2S,3S,4R,5R,6R)-5-acetamido-6-[[[(2R,3S,4R,5R)-5-(2,4-
HETNAM   2 HP7 dioxopyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-
HETNAM   3 HP7 hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxy-3,4-dihyd
HETNAM   4 HP7 roxy-oxane-2-carboxylic acid
FORMUL      HP7    C17 H25 N3 O18 P2

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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science