Structure based on 3oa0 | Ideal structure |
|
Name: (2s,3s,4r,5r,6r)-5-acetamido-6-[[[(2r,3s,4r,5r)-5-(2,4-dioxopyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxy-3,4-dihydroxy-oxane-2-carboxylic acid |
Formula: C17 H25 N3 O18 P2 |
Weight: 621.337 |
SMILES: "CC(=O)N[CH]1[CH](O)[CH](O)[CH](O[CH]1O[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)N3C=CC(=O)NC3=O)C(O)=O" |
Spacial conformation based on PDB
3oa0. Also present on 3q2i, 3q2k |
RESIDUE HP7 65
CONECT N1 3 C2 C6 C1C
CONECT C2 3 N1 O2 N3
CONECT O2 1 C2
CONECT N3 3 C2 C4 HN3
CONECT C4 3 N3 O4 C5
CONECT O4 1 C4
CONECT C5 3 C4 C6 H5
CONECT C6 3 N1 C5 H6
CONECT PA 4 O1A O2A O3A O5C
CONECT PB 4 O1B O2B O3A O3B
CONECT O'P 1 C6'
CONECT O'Q 2 C6' HO'Q
CONECT C1' 4 C2' O3B O5' H1'
CONECT O1A 1 PA
CONECT O1B 1 PB
CONECT C1C 4 N1 C2C O4C H1C
CONECT C2' 4 C1' N2' C3' H2'
CONECT N2' 3 C2' C7' HN2'
CONECT O2A 2 PA HO2A
CONECT O2B 2 PB HO2B
CONECT C2C 4 C1C O2C C3C H2C
CONECT O2C 2 C2C HO2C
CONECT C3' 4 C2' O3' C4' H3'
CONECT O3' 2 C3' HO3'
CONECT O3A 2 PA PB
CONECT O3B 2 PB C1'
CONECT C3C 4 C2C O3C C4C H3C
CONECT O3C 2 C3C HO3C
CONECT C4' 4 C3' O4' C5' H4'
CONECT O4' 2 C4' HO4'
CONECT C4C 4 C3C O4C C5C H4C
CONECT O4C 2 C1C C4C
CONECT C5' 4 C4' O5' C6' H5'
CONECT O5' 2 C1' C5'
CONECT C5C 4 C4C O5C H5C H5CA
CONECT O5C 2 PA C5C
CONECT C6' 3 O'P O'Q C5'
CONECT C7' 3 N2' O7' C8'
CONECT O7' 1 C7'
CONECT C8' 4 C7' H8' H8'A H8'B
CONECT H5 1 C5
CONECT H6 1 C6
CONECT HO'Q 1 O'Q
CONECT H1' 1 C1'
CONECT H1C 1 C1C
CONECT H2' 1 C2'
CONECT HN2' 1 N2'
CONECT HO2A 1 O2A
CONECT HO2B 1 O2B
CONECT H2C 1 C2C
CONECT HO2C 1 O2C
CONECT H3' 1 C3'
CONECT HO3' 1 O3'
CONECT H3C 1 C3C
CONECT HO3C 1 O3C
CONECT H4' 1 C4'
CONECT HO4' 1 O4'
CONECT H4C 1 C4C
CONECT H5' 1 C5'
CONECT H5C 1 C5C
CONECT H5CA 1 C5C
CONECT H8' 1 C8'
CONECT H8'A 1 C8'
CONECT H8'B 1 C8'
CONECT HN3 1 N3
END
HET HP7 65
HETNAM HP7 (2S,3S,4R,5R,6R)-5-acetamido-6-[[[(2R,3S,4R,5R)-5-(2,4-
HETNAM 2 HP7 dioxopyrimidin-1-yl)-3,4-dihydroxy-oxolan-2-yl]methoxy-
HETNAM 3 HP7 hydroxy-phosphoryl]oxy-hydroxy-phosphoryl]oxy-3,4-dihyd
HETNAM 4 HP7 roxy-oxane-2-carboxylic acid
FORMUL HP7 C17 H25 N3 O18 P2