Structure based on 109d

Ideal structure
Name: 5-(2-imidazolinyl)-2-[2-(4-hydroxyphenyl)-5-benzimidazolyl]benzimidazole
Formula: C23 H20 N6 O
Weight: 396.445
SMILES: "Oc1ccc(cc1)c2[nH]c3cc(ccc3n2)c4[nH]c5cc(ccc5n4)C6NCCN6"
Spacial conformation based on PDB 109d
RESIDUE   IBB     50
CONECT      C1     4 C4   N1   N2   H1  
CONECT      C2     4 C3   N1   H21A H22 
CONECT      C3     4 C2   N2   H31  H32 
CONECT      C4     3 C1   C5   C9  
CONECT      C5     3 C4   C6   H5  
CONECT      C6     3 C5   C7   H6  
CONECT      C7     3 C6   C8   N4  
CONECT      C8     3 C7   C9   N3  
CONECT      C9     3 C4   C8   H9  
CONECT      C10    3 C22  N3   N4  
CONECT      C11    3 C12  C23  N6  
CONECT      C12    3 C11  C13  N5  
CONECT      C13    3 C12  C14  H13 
CONECT      C14    3 C13  C22  H14 
CONECT      C15    3 C16  N5   N6  
CONECT      C16    3 C15  C17  C21 
CONECT      C17    3 C16  C18  H17 
CONECT      C18    3 C17  C19  H18 
CONECT      C19    3 C18  C20  O1  
CONECT      C20    3 C19  C21  H20 
CONECT      C21    3 C16  C20  H21 
CONECT      C22    3 C10  C14  C23 
CONECT      C23    3 C11  C22  H23 
CONECT      N1     3 C1   C2   HN1 
CONECT      N2     3 C1   C3   HN2 
CONECT      N3     3 C8   C10  HN3 
CONECT      N4     2 C7   C10 
CONECT      N5     2 C12  C15 
CONECT      N6     3 C11  C15  HN6 
CONECT      O1     2 C19  HO1 
CONECT      H1     1 C1  
CONECT      H21A   1 C2  
CONECT      H22    1 C2  
CONECT      H31    1 C3  
CONECT      H32    1 C3  
CONECT      H5     1 C5  
CONECT      H6     1 C6  
CONECT      H9     1 C9  
CONECT      H13    1 C13 
CONECT      H14    1 C14 
CONECT      H17    1 C17 
CONECT      H18    1 C18 
CONECT      H20    1 C20 
CONECT      H21    1 C21 
CONECT      H23    1 C23 
CONECT      HN1    1 N1  
CONECT      HN2    1 N2  
CONECT      HN3    1 N3  
CONECT      HN6    1 N6  
CONECT      HO1    1 O1  
END   
HET    IBB             50
HETNAM     IBB 5-(2-IMIDAZOLINYL)-2-[2-(4-HYDROXYPHENYL)-5-BENZIMIDAZO
HETNAM   2 IBB LYL]BENZIMIDAZOLE
FORMUL      IBB    C23 H20 N6 O1

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uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science