Structure based on 1ibg

Ideal structure
Name: ouabain
Formula: C29 H44 O12
Weight: 584.652
SMILES: "C[CH]1O[CH](O[CH]2C[CH](O)[C]3(CO)[CH]4[CH](O)C[C]5(C)[CH](CC[C]5(O)[CH]4CC[C]3(O)C2)C6=CC(=O)OC6)[CH](O)[CH](O)[CH]1O"
Spacial conformation based on PDB 1ibg.
Also present in other 8 PDB entries.
RESIDUE   OBN     85
CONECT      C1     4 C2   C10  O1   H1  
CONECT      C2     4 C1   C3   H21  H22A
CONECT      C3     4 C2   C4   O3   H3  
CONECT      C4     4 C3   C5   H41  H42 
CONECT      C5     4 C4   C6   C10  O5  
CONECT      C6     4 C5   C7   H61  H62 
CONECT      C7     4 C6   C8   H71  H72 
CONECT      C8     4 C7   C9   C14  H8  
CONECT      C9     4 C8   C10  C11  H9  
CONECT      C10    4 C1   C5   C9   C19 
CONECT      C11    4 C9   C12  O11  H11 
CONECT      C12    4 C11  C13  H121 H122
CONECT      C13    4 C12  C14  C17  C18 
CONECT      C14    4 C8   C13  C15  O14 
CONECT      C15    4 C14  C16  H151 H152
CONECT      C16    4 C15  C17  H161 H162
CONECT      C17    4 C13  C16  C20  H17 
CONECT      C18    4 C13  H181 H182 H183
CONECT      C19    4 C10  O19  H191 H192
CONECT      C20    3 C17  C21  C22 
CONECT      C21    4 C20  O21  H211 H212
CONECT      C22    3 C20  C23  H22 
CONECT      C23    3 C22  O21  O23 
CONECT      C1'    4 C2'  O3   O5'  H1' 
CONECT      C2'    4 C1'  C3'  O2'  H2' 
CONECT      C3'    4 C2'  C4'  O3'  H3' 
CONECT      C4'    4 C3'  C5'  O4'  H4' 
CONECT      C5'    4 C4'  C6'  O5'  H5' 
CONECT      C6'    4 C5'  H6'1 H6'2 H6'3
CONECT      O1     2 C1   HO1 
CONECT      O3     2 C3   C1' 
CONECT      O5     2 C5   HO5 
CONECT      O11    2 C11  HOE 
CONECT      O14    2 C14  HOF 
CONECT      O19    2 C19  HON 
CONECT      O21    2 C21  C23 
CONECT      O23    1 C23 
CONECT      O2'    2 C2'  HO2'
CONECT      O3'    2 C3'  HO3'
CONECT      O4'    2 C4'  HO4'
CONECT      O5'    2 C1'  C5' 
CONECT      H1     1 C1  
CONECT      H21    1 C2  
CONECT      H22A   1 C2  
CONECT      H3     1 C3  
CONECT      H41    1 C4  
CONECT      H42    1 C4  
CONECT      H61    1 C6  
CONECT      H62    1 C6  
CONECT      H71    1 C7  
CONECT      H72    1 C7  
CONECT      H8     1 C8  
CONECT      H9     1 C9  
CONECT      H11    1 C11 
CONECT      H121   1 C12 
CONECT      H122   1 C12 
CONECT      H151   1 C15 
CONECT      H152   1 C15 
CONECT      H161   1 C16 
CONECT      H162   1 C16 
CONECT      H17    1 C17 
CONECT      H181   1 C18 
CONECT      H182   1 C18 
CONECT      H183   1 C18 
CONECT      H191   1 C19 
CONECT      H192   1 C19 
CONECT      H211   1 C21 
CONECT      H212   1 C21 
CONECT      H22    1 C22 
CONECT      H1'    1 C1' 
CONECT      H2'    1 C2' 
CONECT      H3'    1 C3' 
CONECT      H4'    1 C4' 
CONECT      H5'    1 C5' 
CONECT      H6'1   1 C6' 
CONECT      H6'2   1 C6' 
CONECT      H6'3   1 C6' 
CONECT      HO1    1 O1  
CONECT      HO5    1 O5  
CONECT      HOE    1 O11 
CONECT      HOF    1 O14 
CONECT      HON    1 O19 
CONECT      HO2'   1 O2' 
CONECT      HO3'   1 O3' 
CONECT      HO4'   1 O4' 
END   
HET    OBN             85
HETNAM     OBN OUABAIN
FORMUL      OBN    C29 H44 O12

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science