Structure based on 1qf4 |
Ideal structure |
|
| Name: (c8-r)-hydantocidin 5'-phosphate |
| Formula: C13 H22 N3 O13 P |
| Weight: 459.300 |
| SMILES: "OCN(O)[CH](CCCN1C(=O)N[C]2(O[CH](CO[P](O)(O)=O)[CH](O)[CH]2O)C1=O)C(O)=O" |
| Spacial conformation based on PDB
1qf4 |
RESIDUE RPD 52
CONECT O1P 1 P
CONECT O2P 2 P HO2P
CONECT O3P 2 P HO3P
CONECT P 4 O1P O2P O3P O5'
CONECT O5' 2 P C5'
CONECT C5' 4 O5' C4' H5'1 H5'2
CONECT C4' 4 C5' O4' C3' H4
CONECT O4' 2 C4' C1'
CONECT C3' 4 C4' O3' C2' H3
CONECT O3' 2 C3' HO3'
CONECT C2' 4 C3' O2' C1' H2
CONECT O2' 2 C2' HO2'
CONECT C1' 4 O4' C2' N1 C4
CONECT N1 3 C1' C2 HN1
CONECT C2 3 N1 O2 N3
CONECT O2 1 C2
CONECT N3 3 C2 C4 C5A
CONECT C4 3 C1' N3 O4
CONECT O4 1 C4
CONECT C5A 4 N3 C6A H51 H52
CONECT C6A 4 C5A C7A H61 H62
CONECT C7A 4 C6A C8A H71 H72
CONECT C8A 4 C7A C9A NAA H81
CONECT C9A 3 C8A OJA OKA
CONECT OJA 2 C9A H91
CONECT OKA 1 C9A
CONECT NAA 3 C8A OAA CBA
CONECT OAA 2 NAA H10
CONECT CBA 4 NAA OBA H111 H112
CONECT OBA 2 CBA H11
CONECT HO2P 1 O2P
CONECT HO3P 1 O3P
CONECT H5'1 1 C5'
CONECT H5'2 1 C5'
CONECT H4 1 C4'
CONECT H3 1 C3'
CONECT HO3' 1 O3'
CONECT H2 1 C2'
CONECT HO2' 1 O2'
CONECT HN1 1 N1
CONECT H51 1 C5A
CONECT H52 1 C5A
CONECT H61 1 C6A
CONECT H62 1 C6A
CONECT H71 1 C7A
CONECT H72 1 C7A
CONECT H81 1 C8A
CONECT H91 1 OJA
CONECT H10 1 OAA
CONECT H111 1 CBA
CONECT H112 1 CBA
CONECT H11 1 OBA
END
HET RPD 52
HETSYN RPD [8,9-DIHYDROXY-3-(4-CARBOXY-HYDROXY-HYDROXYMETHYL-AMINO
HETSYN 2 RPD -BUTYL)-2,4-DIOXO-6-OXA-1,3-DIAZA-SPIRO[4.4]NON-7-YLMET
HETSYN 3 RPD HYL] PHOSPHATE
HETNAM RPD (C8-R)-HYDANTOCIDIN 5'-PHOSPHATE
FORMUL RPD C13 H22 N3 O13 P1
MONOMER page