Structure based on 1rqk

Ideal structure
Name: 3,4-dihydrospheroidene
Formula: C41 H62 O
Weight: 570.930
SMILES: "COC(C)(C)CCCC(C)=CC=CC(C)=CC=CC(C)=CC=CC=C(C)C=CC=C(C)CCC=C(C)CCC=C(C)C"
Spacial conformation based on PDB 1rqk
RESIDUE   SP2    104
CONECT      CMA    4 O1   HMA1 HMA2 HMA3
CONECT      O1     2 CMA  C1  
CONECT      C1     4 O1   CM1  CM2  C2  
CONECT      CM1    4 C1   HM11 HM12 HM13
CONECT      CM2    4 C1   HM21 HM22 HM23
CONECT      C2     4 C1   C3   H21A H22 
CONECT      C3     4 C2   C4   H31  H32 
CONECT      C4     4 C3   C5   H41  H42 
CONECT      C5     3 C4   CM3  C6  
CONECT      CM3    4 C5   HM31 HM32 HM33
CONECT      C6     3 C5   C7   H6  
CONECT      C7     3 C6   C8   H7  
CONECT      C8     3 C7   C9   H8  
CONECT      C9     3 C8   CM4  C10 
CONECT      CM4    4 C9   HM41 HM42 HM43
CONECT      C10    3 C9   C11  H10 
CONECT      C11    3 C10  C12  H11 
CONECT      C12    3 C11  C13  H12 
CONECT      C13    3 C12  CM5  C14 
CONECT      CM5    4 C13  HM51 HM52 HM53
CONECT      C14    3 C13  C15  H14 
CONECT      C15    3 C14  C16  H15 
CONECT      C16    3 C15  C17  H16 
CONECT      C17    3 C16  C18  H17 
CONECT      C18    3 C17  CM6  C19 
CONECT      CM6    4 C18  HM61 HM62 HM63
CONECT      C19    3 C18  C20  H19 
CONECT      C20    3 C19  C21  H20 
CONECT      C21    3 C20  C22  H21 
CONECT      C22    3 C21  CM7  C23 
CONECT      CM7    4 C22  HM71 HM72 HM73
CONECT      C23    4 C22  C24  H231 H232
CONECT      C24    4 C23  C25  H241 H242
CONECT      C25    3 C24  C26  H25 
CONECT      C26    3 C25  CM8  C27 
CONECT      CM8    4 C26  HM81 HM82 HM83
CONECT      C27    4 C26  C28  H271 H272
CONECT      C28    4 C27  C29  H281 H282
CONECT      C29    3 C28  C30  H29 
CONECT      C30    3 C29  CMB  CM9 
CONECT      CMB    4 C30  HMB1 HMB2 HMB3
CONECT      CM9    4 C30  HM91 HM92 HM93
CONECT      HMA1   1 CMA 
CONECT      HMA2   1 CMA 
CONECT      HMA3   1 CMA 
CONECT      HM11   1 CM1 
CONECT      HM12   1 CM1 
CONECT      HM13   1 CM1 
CONECT      HM21   1 CM2 
CONECT      HM22   1 CM2 
CONECT      HM23   1 CM2 
CONECT      H21A   1 C2  
CONECT      H22    1 C2  
CONECT      H31    1 C3  
CONECT      H32    1 C3  
CONECT      H41    1 C4  
CONECT      H42    1 C4  
CONECT      HM31   1 CM3 
CONECT      HM32   1 CM3 
CONECT      HM33   1 CM3 
CONECT      H6     1 C6  
CONECT      H7     1 C7  
CONECT      H8     1 C8  
CONECT      HM41   1 CM4 
CONECT      HM42   1 CM4 
CONECT      HM43   1 CM4 
CONECT      H10    1 C10 
CONECT      H11    1 C11 
CONECT      H12    1 C12 
CONECT      HM51   1 CM5 
CONECT      HM52   1 CM5 
CONECT      HM53   1 CM5 
CONECT      H14    1 C14 
CONECT      H15    1 C15 
CONECT      H16    1 C16 
CONECT      H17    1 C17 
CONECT      HM61   1 CM6 
CONECT      HM62   1 CM6 
CONECT      HM63   1 CM6 
CONECT      H19    1 C19 
CONECT      H20    1 C20 
CONECT      H21    1 C21 
CONECT      HM71   1 CM7 
CONECT      HM72   1 CM7 
CONECT      HM73   1 CM7 
CONECT      H231   1 C23 
CONECT      H232   1 C23 
CONECT      H241   1 C24 
CONECT      H242   1 C24 
CONECT      H25    1 C25 
CONECT      HM81   1 CM8 
CONECT      HM82   1 CM8 
CONECT      HM83   1 CM8 
CONECT      H271   1 C27 
CONECT      H272   1 C27 
CONECT      H281   1 C28 
CONECT      H282   1 C28 
CONECT      H29    1 C29 
CONECT      HMB1   1 CMB 
CONECT      HMB2   1 CMB 
CONECT      HMB3   1 CMB 
CONECT      HM91   1 CM9 
CONECT      HM92   1 CM9 
CONECT      HM93   1 CM9 
END   
HET    SP2            104
HETNAM     SP2 3,4-DIHYDROSPHEROIDENE
FORMUL      SP2    C41 H62 O1

This OCA MONOMER page
uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science