Structure based on 1dpn

Ideal structure
Name: 2'-deoxy-2'-fluoro-arabino-furanosyl thymine-5'-phosphate
Formula: C10 H14 F N2 O8 P
Weight: 340.199
SMILES: "CC1=CN([CH]2O[CH](CO[P](O)(O)=O)[CH](O)[CH]2F)C(=O)NC1=O"
Spacial conformation based on PDB 1dpn.
Also present in other 12 PDB entries.
RESIDUE   TAF     36
CONECT      P      4 OP1  OP2  OP3  O5' 
CONECT      OP1    2 P    HOP1
CONECT      OP2    2 P    HOP2
CONECT      OP3    1 P   
CONECT      O5'    2 P    C5' 
CONECT      N1     3 C6   C2   C1' 
CONECT      C6     3 N1   C5   H6  
CONECT      C2     3 N1   O2   N3  
CONECT      O2     1 C2  
CONECT      N3     3 C2   C4   H3  
CONECT      C4     3 N3   O4   C5  
CONECT      O4     1 C4  
CONECT      C5     3 C6   C4   C5M 
CONECT      C5M    4 C5   H71  H72  H73 
CONECT      F2'    1 C2' 
CONECT      C2'    4 F2'  C1'  C3'  H2' 
CONECT      C5'    4 O5'  C4'  H5'  H5''
CONECT      C4'    4 C5'  O4'  C3'  H4' 
CONECT      O4'    2 C4'  C1' 
CONECT      C1'    4 N1   C2'  O4'  H1' 
CONECT      C3'    4 C2'  C4'  O3'  H3' 
CONECT      O3'    2 C3'  HO'3
CONECT      HOP1   1 OP1 
CONECT      HOP2   1 OP2 
CONECT      H6     1 C6  
CONECT      H3     1 N3  
CONECT      H71    1 C5M 
CONECT      H72    1 C5M 
CONECT      H73    1 C5M 
CONECT      H2'    1 C2' 
CONECT      H5'    1 C5' 
CONECT      H5''   1 C5' 
CONECT      H4'    1 C4' 
CONECT      H1'    1 C1' 
CONECT      H3'    1 C3' 
CONECT      HO'3   1 O3' 
END   
HET    TAF             36
HETNAM     TAF 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINE-5'-PHOSPHA
HETNAM   2 TAF TE
FORMUL      TAF    C10 H14 F1 N2 O8 P1

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uses Jmol, developed by the Jmol Development Team (color reference)
OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science