Structure based on 1lc4

Ideal structure
Name: tobramycin
Formula: C18 H37 N5 O9
Weight: 467.514
SMILES: "NC[CH]1O[CH](O[CH]2[CH](N)C[CH](N)[CH](O[CH]3O[CH](CO)[CH](O)[CH](N)[CH]3O)[CH]2O)[CH](N)C[CH]1O"
Spacial conformation based on PDB 1lc4.
Also present in other 12 PDB entries.
RESIDUE   TOY     69
CONECT      C11    4 O11  C21  O51  H11 
CONECT      O11    2 C11  C42 
CONECT      C21    4 C11  N21  C31  H21 
CONECT      N21    3 C21  HN21 HN22
CONECT      C31    4 C21  C41  H311 H312
CONECT      C41    4 C31  O41  C51  H41 
CONECT      O41    2 C41  H41O
CONECT      C51    4 C41  O51  C61  H51 
CONECT      O51    2 C11  C51 
CONECT      C61    4 C51  N61  H611 H612
CONECT      N61    3 C61  HN61 HN62
CONECT      C12    4 N12  C22  C62  H12 
CONECT      N12    3 C12  HN11 HN12
CONECT      C22    4 C12  C32  H221 H222
CONECT      C32    4 C22  N32  C42  H32 
CONECT      N32    3 C32  HN1  HN2 
CONECT      C42    4 O11  C32  C52  H42 
CONECT      C52    4 C42  O52  C62  H52 
CONECT      O52    2 C52  H52O
CONECT      C62    4 C12  C52  O62  H62 
CONECT      O62    2 C62  C13 
CONECT      C13    4 O62  C23  O53  H13 
CONECT      C23    4 C13  O23  C33  H23 
CONECT      O23    2 C23  H23O
CONECT      C33    4 C23  N33  C43  H33 
CONECT      N33    3 C33  HN31 HN32
CONECT      C43    4 C33  O43  C53  H43 
CONECT      O43    2 C43  H43O
CONECT      C53    4 C43  O53  C63  H53 
CONECT      O53    2 C13  C53 
CONECT      C63    4 C53  O63  H631 H632
CONECT      O63    2 C63  H63O
CONECT      H11    1 C11 
CONECT      H21    1 C21 
CONECT      HN21   1 N21 
CONECT      HN22   1 N21 
CONECT      H311   1 C31 
CONECT      H312   1 C31 
CONECT      H41    1 C41 
CONECT      H41O   1 O41 
CONECT      H51    1 C51 
CONECT      H611   1 C61 
CONECT      H612   1 C61 
CONECT      HN61   1 N61 
CONECT      HN62   1 N61 
CONECT      H12    1 C12 
CONECT      HN11   1 N12 
CONECT      HN12   1 N12 
CONECT      H221   1 C22 
CONECT      H222   1 C22 
CONECT      H32    1 C32 
CONECT      HN1    1 N32 
CONECT      HN2    1 N32 
CONECT      H42    1 C42 
CONECT      H52    1 C52 
CONECT      H52O   1 O52 
CONECT      H62    1 C62 
CONECT      H13    1 C13 
CONECT      H23    1 C23 
CONECT      H23O   1 O23 
CONECT      H33    1 C33 
CONECT      HN31   1 N33 
CONECT      HN32   1 N33 
CONECT      H43    1 C43 
CONECT      H43O   1 O43 
CONECT      H53    1 C53 
CONECT      H631   1 C63 
CONECT      H632   1 C63 
CONECT      H63O   1 O63 
END   
HET    TOY             69
HETSYN     TOY 4-AMINO-2-[4,6-DIAMINO-3-(3-AMINO-6-AMINOMETHYL-5-HYDRO
HETSYN   2 TOY XY-TETRAHYDRO-PYRAN-2-YLOXY)-2-HYDROXY-CYCLOHEXYLOXY]-6
HETSYN   3 TOY -HYDROXYMETHYL-TETRAHYDRO-PYRAN-3,5-DIOL
HETNAM     TOY TOBRAMYCIN
FORMUL      TOY    C18 H37 N5 O9

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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014
Bioinformatics Unit
Weizmann Institute of Science