MONOMER pageuses Jmol, developed by the Jmol Development Team (color reference)
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OCA© by Jaime Prilusky, 1996-2004,2006,2010,2014 Bioinformatics Unit Weizmann Institute of Science |
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| Name: p1-(5'-adenosyl)p5-(5'-(3'azido-3'-deoxythymidyl))pentaphosphate | ||
| Formula: C20 H24 N10 O22 P5 | ||
| Weight: 911.327 | ||
| SMILES: "CC1=CN([CH]2C[CH](N=[N+]=[N-])[CH](CO[P]([O-])(=O)O[P]([O-])(=O)O[P]([O-])(=O)O[P]([O-])(=O)O[P]([O-])(=O)OC[CH]3O[CH]([CH](O)[CH]3O)n4cnc5c(N)ncnc45)O2)C(=O)NC1=O" | ||
| Spacial conformation based on PDB
1e9a. Also present on 5tmp |
RESIDUE Z5A 81 CONECT N1T 3 C2T C6T C1' CONECT C2T 3 N1T O2T N3T CONECT O2T 1 C2T CONECT N3T 3 C2T C4T H3T CONECT C4T 3 N3T O4T C5T CONECT O4T 1 C4T CONECT C5T 3 C4T C6T C7T CONECT C6T 3 N1T C5T H6T CONECT C7T 4 C5T H7T1 H7T2 H7T3 CONECT C5' 4 O5' C4' H5'1 H5'2 CONECT O5' 2 C5' PA CONECT C4' 4 C5' O4' C3' H4' CONECT O4' 2 C4' C1' CONECT C3' 4 C4' C2' NA3 H3' CONECT C2' 4 C3' C1' H2'1 H2'2 CONECT C1' 4 N1T O4' C2' H1' CONECT NA3 2 C3' N3B CONECT N3B 2 NA3 N3C CONECT N3C 1 N3B CONECT PA 4 O5' O1P O2P OPA CONECT O1P 1 PA CONECT O2P 1 PA CONECT OPA 2 PA PB CONECT PB 4 OPA O3P O4P OPB CONECT O3P 1 PB CONECT O4P 1 PB CONECT OPB 2 PB PC CONECT PC 4 OPB O5P O6P OPC CONECT O5P 1 PC CONECT O6P 1 PC CONECT OPC 2 PC PD CONECT PD 4 OPC O7P O8P OPD CONECT O7P 1 PD CONECT O8P 1 PD CONECT OPD 2 PD PE CONECT PE 4 OPD O9P OAP O5B CONECT O9P 1 PE CONECT OAP 1 PE CONECT O5B 2 PE C5B CONECT C5B 4 O5B C4B H5A1 H5A2 CONECT C4B 4 C5B O4B C3B H4B CONECT O4B 2 C4B C1B CONECT C3B 4 C4B O3' C2B H3B CONECT O3' 2 C3B HO'3 CONECT C2B 4 C3B O2' C1B H2' CONECT O2' 2 C2B HO'2 CONECT C1B 4 O4B C2B N9A H1B CONECT N9A 3 C1B C8A C4A CONECT C8A 3 N9A N7A H8A CONECT N7A 2 C8A C5A CONECT C5A 3 N7A C6A C4A CONECT C6A 3 C5A N6A N1A CONECT N6A 3 C6A H6A1 H6A2 CONECT N1A 2 C6A C2A CONECT C2A 3 N1A N3A H2A CONECT N3A 2 C2A C4A CONECT C4A 3 N9A C5A N3A CONECT H3T 1 N3T CONECT H6T 1 C6T CONECT H7T1 1 C7T CONECT H7T2 1 C7T CONECT H7T3 1 C7T CONECT H5'1 1 C5' CONECT H5'2 1 C5' CONECT H4' 1 C4' CONECT H3' 1 C3' CONECT H2'1 1 C2' CONECT H2'2 1 C2' CONECT H1' 1 C1' CONECT H5A1 1 C5B CONECT H5A2 1 C5B CONECT H4B 1 C4B CONECT H3B 1 C3B CONECT HO'3 1 O3' CONECT H2' 1 C2B CONECT HO'2 1 O2' CONECT H1B 1 C1B CONECT H8A 1 C8A CONECT H6A1 1 N6A CONECT H6A2 1 N6A CONECT H2A 1 C2A END HET Z5A 81 HETNAM Z5A P1-(5'-ADENOSYL)P5-(5'-(3'AZIDO-3'-DEOXYTHYMIDYL))PENTA HETNAM 2 Z5A PHOSPHATE FORMUL Z5A C20 H24 N10 O22 P5 5-
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This OCA
MONOMER page uses Jmol, developed by the Jmol Development Team (color reference)
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