RNA Databases and Resources
WEB Resources
RNA 3-D Structure Databases
- open in new windowRiboWEB Project - a knowledge base with information about ribosomal structure data
- open in new windowRNABricks provides information about the recurrent RNA motifs and their interactions
- open in new windowBPS - a database of RNA base pairs with quantitative information on the spatial arrangements of interacting bases
- open in new windowSCOR Structural Classification of RNAs at Berkeley
RNA 2-D Structure and 1-D Databases
- open in new windowRNAi Database
- open in new windowRNAdb - a comprehensive mammalian noncoding RNA database
- open in new window5S Ribosomal RNA Database
- open in new windowDRC - Database of Ribosomal Crosslinks
- open in new windowRibosomal Database Project II
- open in new windowRibosomal RNA Mutational Database
- open in new windowEuropean Ribosomal RNA Database
- open in new windowRISSC - Ribosomal Internal Spacer Sequence Collection
- open in new windowGutell Lab Comperative RNA Website
- open in new windowtRNA and tRNA Gene Sequences
- open in new windowGtRDB - The Genomic tRNA Databasei
- open in new windowMITOMAP - A human mitochondrial genome database (including information on MtDNA Base Substitution Diseases: rRNA/tRNA Point Mutations)
- open in new windowAARS Aminoacyl-tRNA Synthetases Database
- open in new windowRfam Database - a collection of RNA families, each represented by multiple sequence alignments, consensus secondary structures and covariance models (CMs)
- open in new windowRNA Editing Web Site
- open in new windowUridine Insertion/Deletion RNA Editing Web Site
- open in new windowUTRdb - Database of Untranslated Regions of Eukaryotic mRNAs
- open in new windowUTRSite a collection of functional sequence patterns located in 5' or 3' UTR sequences
- open in new windowNonCodingRNA database
- open in new windowDASHR - Database of small human noncoding RNAs
- open in new windowsnoRNA Database
- open in new windowNon-Coding RNAs in Plants
- open in new windowFastDB
- open in new windowprobeBase - a curated database of rRNA-targetede oligonucleotide probes and primers
- open in new windowRECODE - Database of translational recoding events
- open in new windowRNA Modification Database
- open in new windowRegRNA - an integrated web server for identifying functional RNA motifs and sites
- open in new windowRNase P Database
- open in new windowSRPDB a Signal Recognition Particle Database
- open in new windowYeast Intron DB - at Ares lab