Analysis of interatomic Contacts of Structural Units in PDB entry:
1TF5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 1TF5 entry

There is 1 chain in PDB entry 1TF5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 0ILE 780
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 36 helices in PDB entry 1TF5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
0 7Right-handed alpha
Helix 2
2
A
17 29Right-handed alpha
Helix 3
3
A
30 35Right-handed alpha
Helix 4
4
A
37 54Right-handed alpha
Helix 5
5
A
57 78Right-handed alpha
Helix 6
6
A
82 94Right-handed alpha
Helix 7
7
A
105 119Right-handed alpha
Helix 8
8
A
130 148Right-handed alpha
Helix 9
9
A
160 170Right-handed alpha
Helix 10
10
A
177 188Right-handed alpha
Helix 11
11
A
192 196Right-handed 310
Helix 12
12
A
208 214Right-handed alpha
Helix 13
13
A
231 242Right-handed alpha
Helix 14
14
A
262 273Right-handed alpha
Helix 15
15
A
280 282Right-handed 310
Helix 16
16
A
283 299Right-handed alpha
Helix 17
17
A
332 341Right-handed alpha
Helix 18
18
A
357 362Right-handed alpha
Helix 19
19
A
374 376Right-handed 310
Helix 20
20
A
377 386Right-handed alpha
Helix 21
21
A
410 428Right-handed alpha
Helix 22
22
A
438 451Right-handed alpha
Helix 23
23
A
463 472Right-handed alpha
Helix 24
24
A
499 503Right-handed 310
Helix 25
25
A
515 524Right-handed alpha
Helix 26
26
A
525 526Right-handed 310
Helix 27
27
A
527 531Right-handed 310
Helix 28
28
A
544 548Right-handed 310
Helix 29
29
A
549 562Right-handed alpha
Helix 30
30
A
571 619Right-handed alpha
Helix 31
31
A
623 642Right-handed alpha
Helix 32
32
A
656 663Right-handed alpha
Helix 33
33
A
680 703Right-handed alpha
Helix 34
34
A
706 737Right-handed alpha
Helix 35
35
A
738 741Right-handed 310
Helix 36
36
A
747 777Right-handed alpha
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There are 5 sheets in PDB entry 1TF5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 154first strand
Strand 2
A
172 176parallel
Strand 3
A
124 128parallel
Strand 4
A
203 207parallel
Strand 5
A
366 371parallel
Strand 6
A
97 99parallel
Strand 7
A
389 391parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
220 228first strand
Strand 2
A
349 356anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
306 309first strand
Strand 2
A
312 315anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 402first strand
Strand 2
A
533 540parallel
Strand 3
A
406 408parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 402first strand
Strand 2
A
533 540parallel
Strand 3
A
505 509parallel
Strand 4
A
432 436parallel
Strand 5
A
480 484parallel
Strand 6
A
457 459parallel
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