1BCT Photoreceptor date Jul 07, 1993
title Three-Dimensional Structure Of Proteolytic Fragment 163-231 Bacterioopsin Determined From Nuclear Magnetic Resonance Da Solution
authors D.E.Nolde, I.L.Barsukov, A.L.Lomize, A.S.Arseniev
compound source
Molecule: Bacteriorhodopsin
Chain: A
Engineered: Yes
 Organism_scientific: Halobacterium Salinarum
Organism_taxid: 2242
methodSolution NMR
related structures by homologous chain: 1L0M, 1R2N
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThree-dimensional structure of proteolytic fragment 163-231 of bacterioopsin determined from nuclear magnetic resonance data in solution., Barsukov IL, Nolde DE, Lomize AL, Arseniev AS, Eur J Biochem 1992 Jun 15;206(3):665-72. PMID:1606953
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (262 Kb) [Save to disk]
  • Biological Unit Coordinates (1bct.pdb1.gz) 18 Kb
  • CSU: Contacts of Structural Units for 1BCT
  • Original NMR restraints for 1BCT from PDB
  • Retrieve 1BCT in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1BCT from S2C, [Save to disk]
    • View 1BCT in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1BCT
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1BCT, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1bct__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1bct] [1bct_A]
  • SWISS-PROT database: [P02945]
  • Belongs to the ion-translocating microbial rhodopsin (mr) family according to TCDB.
  • Domain organization of [BACR_HALSA] by SWISSPFAM
    • Other resources with information on 1BCT
  • Community annotation for 1BCT at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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