1LZ9	Hydrolase	date	Mar 15, 1999
title	Anomalous Signal Of Solvent Bromines Used For Phasing Of Lys
authors	Z.Dauter, M.Dauter
compound		source
Molecule: Protein (Lysozyme) Chain: A Ec: 3.2.1.17 Other_details: Bromide And Sodium Ions Present		Organism_scientific: Gallus Gallus Organism_common: Chicken Organism_taxid: 9031 Cell: Egg Cellular_location: Cytoplasm (White)
symmetry	Space Group: P 43 21 2	R_factor 0.210 R_Free 0.290
crystal cell	length a length b length c angle alpha angle beta angle gamma 78.600 78.600 37.200 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.70 Å
ligand	BR, NA	enzyme	Hydrolase E.C.3.2.1.17 BRENDA
related structures	by homologous chain: 1KXX, 1LZN
Gene Ontology	Chain Function Process Component A
Primary reference	Anomalous signal of solvent bromides used for phasing of lysozyme., Dauter Z, Dauter M, J Mol Biol 1999 May 28;289(1):93-101. PMID:10339408

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (29 Kb) [Save to disk] Biological Unit Coordinates (1lz9.pdb1.gz) 24 Kb LPC: Ligand-Protein Contacts for 1LZ9 CSU: Contacts of Structural Units for 1LZ9 Likely Quarternary Molecular Structure file(s) for 1LZ9 Structure Factors (115 Kb) Retrieve 1LZ9 in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1LZ9 from S2C, [Save to disk] Re-refined 1lz9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1LZ9 in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1LZ9

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1LZ9, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1lz9a_, region A [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1lz9] [1lz9_A] SWISS-PROT database: [P00698] Domain organization of [LYSC_CHICK] by SWISSPFAM Domain found in 1LZ9: [LYZ1 ] by SMART

Other resources with information on 1LZ9

Community annotation for 1LZ9 at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Domain movements in 1LZ9 from the Database of Macromolecular Movements. Images from IMB Jena Image Library of Biological Macromolecules.

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