1FNX Immune System Rna date Aug 24, 2000
title Solution Structure Of The Huc Rbd1-Rbd2 Complexed With The A Element
authors M.Inoue, M.Hirao, K.Kasashima, I.S.Kim, G.Kawai, T.Kigawa, H.Saka Y.Muto, S.Yokoyama
compound source
Molecule: Au-Rich Rna Element
Chain: R
Engineered: Yes
Other_details: Rna Decamer
 Synthetic: Yes

Molecule: Hu Antigen C
Chain: H
Fragment: The First And The Second Rna-Binding Domains
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Expression_system: Escherichia Coli
Expression_system_taxid: 562
methodSolution NMR
related structures by homologous chain: 1D8Z, 1D9A, 1G2E
Gene
Ontology
ChainFunctionProcessComponent
H


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1139 Kb) [Save to disk]
  • Biological Unit Coordinates (1fnx.pdb1.gz) 53 Kb
  • CSU: Contacts of Structural Units for 1FNX
  • Original NMR restraints for 1FNX from PDB
  • Retrieve 1FNX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1FNX from S2C, [Save to disk]
    • View 1FNX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1FNX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1FNX, from MSDmotif at EBI
  • Structure summary from SCOR (Structural Classification of RNA)
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1fnxh2, region H:121-208 [Jmol] [rasmolscript] [script source]
        - Domain d1fnxh1, region H:35-120 [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1fnx] [1fnx_H] [1fnx_R]
  • SWISS-PROT database: [Q60900]
  • Domain organization of [ELAV3_MOUSE] by SWISSPFAM
  • Domain found in 1FNX: [RRM ] by SMART
    • Other resources with information on 1FNX
  • Community annotation for 1FNX at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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