1I04 Transport Protein date Jan 28, 2001
title Crystal Structure Of Mouse Major Urinary Protein-I From Mous
authors D.E.Timm, L.J.Baker, H.Mueller, L.Zidek, M.V.Novotny
compound source
Molecule: Major Urinary Protein I
Chain: A
Synonym: Alpha-2u-Globulin I
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
symmetry Space Group: P 32 2 1
R_factor 0.219 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
60.840 60.840 100.290 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
related structures by homologous chain: 1I05, 1MUP
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceStructural basis of pheromone binding to mouse major urinary protein (MUP-I)., Timm DE, Baker LJ, Mueller H, Zidek L, Novotny MV, Protein Sci 2001 May;10(5):997-1004. PMID:11316880
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (33 Kb) [Save to disk]
  • Biological Unit Coordinates (1i04.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 1I04
  • Likely Quarternary Molecular Structure file(s) for 1I04
  • Structure Factors (119 Kb)
  • Retrieve 1I04 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1I04 from S2C, [Save to disk]
  • Re-refined 1i04 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1I04 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1I04
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1I04, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1i04a_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1i04] [1i04_A]
  • SWISS-PROT database: [P02762]
  • Domain organization of [MUP6_MOUSE] by SWISSPFAM
  • Other resources with information on 1I04
  • Community annotation for 1I04 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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