1KSR Actin Binding Protein date Feb 07, 1997
title The Repeating Segments Of The F-Actin Cross-Linking Gelation (Abp-120) Have An Immunoglobulin Fold, Nmr, 20 Structures
authors P.Fucini, C.Renner, C.Herberhold, A.A.Noegel, T.A.Holak
compound source
Molecule: Gelation Factor
Chain: A
Fragment: Rod 4
Synonym: Abp-120
Engineered: Yes
Organism_scientific: Dictyostelium Discoideum
Organism_taxid: 44689
Strain: Ax3
Cell_line: Bl21
Cellular_location: Cytoplasm, Cell Cortex
Gene: Abpc
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21 (De)
Expression_system_cellular_location: Cytoplasm
Expression_system_vector_type: T7 Promoter
Expression_system_plasmid: Pt7-7
Expression_system_gene: T7
methodSolution NMR
related structures by homologous chain: 1WLH
Primary referenceThe repeating segments of the F-actin cross-linking gelation factor (ABP-120) have an immunoglobulin-like fold., Fucini P, Renner C, Herberhold C, Noegel AA, Holak TA, Nat Struct Biol 1997 Mar;4(3):223-30. PMID:9164464
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (478 Kb) [Save to disk]
  • Biological Unit Coordinates (1ksr.pdb1.gz) 24 Kb
  • CSU: Contacts of Structural Units for 1KSR
  • Original NMR restraints for 1KSR from PDB
  • Retrieve 1KSR in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1KSR from S2C, [Save to disk]
  • View 1KSR in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1KSR
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1KSR, from MSDmotif at EBI
  • Genome occurence of 1KSR's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ksr__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ksr_A] [1ksr]
  • SWISS-PROT database: [P13466]
  • Domain organization of [GELA_DICDI] by SWISSPFAM
  • Domain found in 1KSR: [IG_FLMN ] by SMART
  • Other resources with information on 1KSR
  • Community annotation for 1KSR at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1KSR from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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