1P9Z Antifungal Protein date May 13, 2003
title The Solution Structure Of Antifungal Peptide Distinct With A Disulfide Motif From Eucommia Ulmoides Oliver
authors R.H.Huang, Y.Xiang, G.Z.Tu, Y.Zhang, D.C.Wang
compound source
Molecule: Eucommia Antifungal Peptide 2
Chain: A
Other_details: Eafp2
 Organism_scientific: Eucommia Ulmoides
Organism_taxid: 4392
Tissue: Bark
methodSolution NMR
ligand PCA enzyme
related structures by homologous chain: 1MMC, 1P9G
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure of eucommia antifungal peptide: a novel structural model distinct with a five-disulfide motif., Huang RH, Xiang Y, Tu GZ, Zhang Y, Wang DC, Biochemistry 2004 May 25;43(20):6005-12. PMID:15147184
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (189 Kb) [Save to disk]
  • Biological Unit Coordinates (1p9z.pdb1.gz) 11 Kb
  • LPC: Ligand-Protein Contacts for 1P9Z
  • CSU: Contacts of Structural Units for 1P9Z
  • Original NMR restraints for 1P9Z from PDB
  • Retrieve 1P9Z in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1P9Z from S2C, [Save to disk]
    • View 1P9Z in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1P9Z
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1P9Z, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1p9za_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1p9z_A] [1p9z]
  • SWISS-PROT database: [P83597]
  • Domain organization of [EAP2_EUCUL] by SWISSPFAM
  • Domain found in 1P9Z: [ChtBD1 ] by SMART
    • Other resources with information on 1P9Z
  • Community annotation for 1P9Z at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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