1SOV	Oxidoreductase	date	Mar 15, 2004
title	Toxoplasma Gondii Bradyzoite-Specific Ldh (Ldh2) Apo Form
authors	K.L.Kavanagh, D.K.Wilson
compound		source
Molecule: L-Lactate Dehydrogenase Chain: A, B Synonym: Ldh, Ldh2 Ec: 1.1.1.27 Engineered: Yes		Organism_scientific: Toxoplasma Gondii Organism_taxid: 5811 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Ptyb12
symmetry	Space Group: I 41 2 2	R_factor 0.173 R_Free 0.201
crystal cell	length a length b length c angle alpha angle beta angle gamma 142.939 142.939 164.518 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.90 Å
ligand		enzyme	Oxidoreductase E.C.1.1.1.27 BRENDA
related structures	by homologous chain: 1PZH, 1SOW
Gene Ontology	Chain Function Process Component A, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (105 Kb) [Save to disk] Biological Unit Coordinates (1sov.pdb1.gz) 198 Kb CSU: Contacts of Structural Units for 1SOV Likely Quarternary Molecular Structure file(s) for 1SOV Structure Factors (586 Kb) Retrieve 1SOV in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1SOV from S2C, [Save to disk] Re-refined 1sov structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1SOV in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1SOV

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1SOV, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1sov_B] [1sov_A] [1sov] SWISS-PROT database: [Q27797] Domain organization of [LDH_TOXGO] by SWISSPFAM

Other resources with information on 1SOV

Community annotation for 1SOV at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

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