1TYG Biosynthetic Protein date Jul 07, 2004
title Structure Of The Thiazole Synthasethis Complex
authors E.C.Settembre, P.C.Dorrestein, H.Zhai, A.Chatterjee, F.W.Mclaffe T.P.Begley, S.E.Ealick
compound source
Molecule: Yjbs
Chain: B, G
Engineered: Yes
Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-16b

Molecule: Thiazole Biosynthesis Protein Thig
Chain: A, C
Engineered: Yes

Organism_scientific: Bacillus Subtilis
Organism_taxid: 1423
Gene: Thig,Bsu11690
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-16b
symmetry Space Group: P 65 2 2
R_factor 0.242 R_Free 0.305
crystal
cell
length a length b length c angle alpha angle beta angle gamma
91.654 91.654 401.300 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.15 Å
ligand PO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C


G, B


Primary referenceThiamin biosynthesis in Bacillus subtilis: structure of the thiazole synthase/sulfur carrier protein complex., Settembre EC, Dorrestein PC, Zhai H, Chatterjee A, McLafferty FW, Begley TP, Ealick SE, Biochemistry 2004 Sep 21;43(37):11647-57. PMID:15362849
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (95 Kb) [Save to disk]
  • Biological Unit Coordinates (1tyg.pdb1.gz) 174 Kb
  • LPC: Ligand-Protein Contacts for 1TYG
  • CSU: Contacts of Structural Units for 1TYG
  • Likely Quarternary Molecular Structure file(s) for 1TYG
  • Structure Factors (136 Kb)
  • Retrieve 1TYG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1TYG from S2C, [Save to disk]
  • Re-refined 1tyg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1TYG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1TYG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1TYG, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1tyga_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1tygb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1tygc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1tygg_, region G [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1tyg_G] [1tyg_A] [1tyg_B] [1tyg] [1tyg_C]
  • SWISS-PROT database: [O31618] [O31617]
  • Domain organization of [THIG_BACSU] [THIS_BACSU] by SWISSPFAM
  • Other resources with information on 1TYG
  • Community annotation for 1TYG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science