1UUM	Oxidoreductase	date	Jan 06, 2004
title	Rat Dihydroorotate Dehydrogenase (Dhod)In Complex With Atova
authors	M.Hansen, J.Le Nours, E.Johansson, T.Antal, A.Ullrich, M.Loffler,
compound		source
Molecule: Dihydroorotate Dehydrogenase Chain: A, B Synonym: Mitochondrial Precursor, Dihydroorotate Oxidase, D Ec: 1.3.99.11 Engineered: Yes		Organism_scientific: Rattus Rattus Organism_common: Black Rat, Roof Rat Organism_taxid: 10117 Expression_system: Escherichia Coli Expression_system_taxid: 562
symmetry	Space Group: P 3	R_factor 0.216 R_Free 0.242
crystal cell	length a length b length c angle alpha angle beta angle gamma 133.150 133.150 50.130 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	AFI, BOG, FMN, ORO	enzyme	Oxidoreductase E.C.1.3.99.11 BRENDA
related structures	by homologous chain: 1D3H, 1UUO
Gene Ontology	Chain Function Process Component A, B
Primary reference	Inhibitor binding in a class 2 dihydroorotate dehydrogenase causes variations in the membrane-associated N-terminal domain., Hansen M, Le Nours J, Johansson E, Antal T, Ullrich A, Loffler M, Larsen S, Protein Sci 2004 Apr;13(4):1031-42. PMID:15044733

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (119 Kb) [Save to disk] Biological Unit Coordinates (1uum.pdb1.gz) 58 Kb Biological Unit Coordinates (1uum.pdb2.gz) 58 Kb LPC: Ligand-Protein Contacts for 1UUM CSU: Contacts of Structural Units for 1UUM Likely Quarternary Molecular Structure file(s) for 1UUM Structure Factors (328 Kb) Retrieve 1UUM in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1UUM from S2C, [Save to disk] Re-refined 1uum structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1UUM in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1UUM

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1UUM, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1uuma_, region A [Jmol] [rasmolscript] [script source]     - Domain d1uumb_, region B [Jmol] [rasmolscript] [script source] Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH Summaries and structural analyses of PDB data files from PDBSum Identification of Protein Pockets & Cavities at CASTp

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1uum_A] [1uum] [1uum_B] SWISS-PROT database: [Q63707] Domain organization of [PYRD_RAT] by SWISSPFAM

Other resources with information on 1UUM

Community annotation for 1UUM at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---