1UUO Oxidoreductase date Jan 08, 2004
title Rat Dihydroorotate Dehydrogenase (Dhod)In Complex With Brequ
authors M.Hansen, J.Le Nours, E.Johansson, T.Antal, A.Ullrich, M.Loffler,
compound source
Molecule: Dihydroorotate Dehydrogenase
Chain: A
Synonym: Mitochondrial Precursor, Dihydroorotate Oxidase, D
Ec: 1.3.99.11
Engineered: Yes
Organism_scientific: Rattus Rattus
Organism_common: Black Rat, Roof Rat
Organism_taxid: 10117
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 2 2 21
R_factor 0.210 R_Free 0.263
crystal
cell
length a length b length c angle alpha angle beta angle gamma
49.753 95.801 144.469 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.44 Å
ligand BRF, FMN, NA, NI, ORO BindingDB enzyme Oxidoreductase E.C.1.3.99.11 BRENDA
related structures by homologous chain: 1UUM
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceInhibitor binding in a class 2 dihydroorotate dehydrogenase causes variations in the membrane-associated N-terminal domain., Hansen M, Le Nours J, Johansson E, Antal T, Ullrich A, Loffler M, Larsen S, Protein Sci 2004 Apr;13(4):1031-42. PMID:15044733
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (62 Kb) [Save to disk]
  • Biological Unit Coordinates (1uuo.pdb1.gz) 57 Kb
  • LPC: Ligand-Protein Contacts for 1UUO
  • CSU: Contacts of Structural Units for 1UUO
  • Likely Quarternary Molecular Structure file(s) for 1UUO
  • Retrieve 1UUO in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UUO from S2C, [Save to disk]
  • View 1UUO in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UUO
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UUO, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1uuoa_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uuo_A] [1uuo]
  • SWISS-PROT database: [Q63707]
  • Domain organization of [PYRD_RAT] by SWISSPFAM
  • Other resources with information on 1UUO
  • Community annotation for 1UUO at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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