1V6A	Oxidoreductase	date	Nov 28, 2003
title	Crystal Structure Of L-Lactate Dehydrogenase From Cyprinus C
authors	K.Watanabe, H.Motoshima
compound		source
Molecule: L-Lactate Dehydrogenase A Chain Chain: A, B Synonym: Ldh Ec: 1.1.1.27		Organism_scientific: Cyprinus Carpio Organism_common: Common Carp Organism_taxid: 7962 Tissue: Skeletal Muscle
symmetry	Space Group: P 41 21 2	R_factor 0.200 R_Free 0.238
crystal cell	length a length b length c angle alpha angle beta angle gamma 156.200 156.200 84.300 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.30 Å
ligand	GLC	enzyme	Oxidoreductase E.C.1.1.1.27 BRENDA
related structures	by homologous chain: 1I10, 5LDH
Gene Ontology	Chain Function Process Component A, B

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (112 Kb) [Save to disk] Biological Unit Coordinates (1v6a.pdb1.gz) 213 Kb LPC: Ligand-Protein Contacts for 1V6A CSU: Contacts of Structural Units for 1V6A Likely Quarternary Molecular Structure file(s) for 1V6A Structure Factors (697 Kb) Retrieve 1V6A in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1V6A from S2C, [Save to disk] Re-refined 1v6a structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1V6A in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1V6A

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1V6A, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1v6a_A] [1v6a] [1v6a_B] SWISS-PROT database: [Q9W7K5] Domain organization of [LDHA_CYPCA] by SWISSPFAM

Other resources with information on 1V6A

Community annotation for 1V6A at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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