1XND Glycosidase date Jun 01, 1994
title High-Resolution Structures Of Xylanases From B. Circulans An Harzianum Identify A New Folding Pattern And Implications F Atomic Basis Of The Catalysis
authors R.L.Campbell, D.R.Rose
compound source
Molecule: Xylanase
Chain: A
Ec: 3.2.1.8
Engineered: Yes
Organism_scientific: Hypocrea Lixii
Organism_taxid: 5544
symmetry Space Group: P 21 21 21
R_factor 0.208 R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.670 94.648 51.548 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand
enzyme Hydrolase E.C.3.2.1.8 BRENDA
related structures by homologous chain: 1H1A
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (34 Kb) [Save to disk]
  • Biological Unit Coordinates (1xnd.pdb1.gz) 30 Kb
  • CSU: Contacts of Structural Units for 1XND
  • Likely Quarternary Molecular Structure file(s) for 1XND
  • Retrieve 1XND in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XND from S2C, [Save to disk]
  • View 1XND in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1XND
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XND, from MSDmotif at EBI
  • Genome occurence of 1XND's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1xnd__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xnd_A] [1xnd]
  • SWISS-PROT database: [P48793]
  • Domain organization of [XYN_TRIHA] by SWISSPFAM
  • Other resources with information on 1XND
  • Community annotation for 1XND at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Domain movements in 1XND from the Database of Macromolecular Movements.
  • Images from IMB Jena Image Library of Biological Macromolecules.

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