1Z70 Oxidoreductase date Mar 23, 2005
title 1.15a Resolution Structure Of The Formylglycine Generating E
authors M.G.Rudolph
compound source
Molecule: C-Alpha-Formyglycine-Generating Enzyme
Chain: X
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Homo Sapiens
Expression_system_common: Human
Expression_system_taxid: 9606
Expression_system_cell_line: Ht1080
Expression_system_cell: Fibrosarcoma Tumor Cells
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Psb4.7pa
symmetry Space Group: P 21 21 2
R_factor 0.138 R_Free 0.170
crystal
cell
length a length b length c angle alpha angle beta angle gamma
62.295 109.765 43.511 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.15 Å
ligand CA, CL, CXS, NAG, OCS enzyme
Primary referenceDe novo calcium/sulfur SAD phasing of the human formylglycine-generating enzyme using in-house data., Roeser D, Dickmanns A, Gasow K, Rudolph MG, Acta Crystallogr D Biol Crystallogr. 2005 Aug;61(Pt 8):1057-66. Epub 2005, Jul 20. PMID:16041070
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (120 Kb) [Save to disk]
  • Biological Unit Coordinates (1z70.pdb1.gz) 114 Kb
  • LPC: Ligand-Protein Contacts for 1Z70
  • CSU: Contacts of Structural Units for 1Z70
  • Likely Quarternary Molecular Structure file(s) for 1Z70
  • Structure Factors (892 Kb)
  • Retrieve 1Z70 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1Z70 from S2C, [Save to disk]
  • Re-refined 1z70 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1Z70 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1Z70
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1Z70, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1z70] [1z70_X]
  • SWISS-PROT database: [Q8NBK3]
  • Domain organization of [SUMF1_HUMAN] by SWISSPFAM
  • Other resources with information on 1Z70
  • Community annotation for 1Z70 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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