1ZSG Transferase date May 24, 2005
title Beta Pix-Sh3 Complexed With An Atypical Peptide From Alpha-P
authors H.R.Mott, D.Nietlispach, K.A.Evetts, D.Owen
compound source
Molecule: Rho Guanine Nucleotide Exchange Factor 7
Chain: A
Fragment: Sequence Database Residues 179-243
Synonym: Pak-Interacting Exchange Factor Beta, Beta-Pix, Co Pix-Sh3;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Arhgef7, Cool1, Kiaa0142, P85spr, Pak3bp, Pixb
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21 De3
Expression_system_vector_type: Pet16b

Molecule: Serinethreonine-Protein Kinase Pak 1
Chain: B
Fragment: Sequence Database Residues 183-204
Synonym: P21-Activated Kinase 1, Pak-1, P65-Pak, Alpha-Pak, Peptide;
Ec: 2.7.1.37
Engineered: Yes
Synthetic: Yes
Other_details: The Peptide Was Chemically Synthesized. The Of The Peptide Is Naturally Found In Homo Sapiens (Human).
methodSolution NMR
ligand
enzyme Transferase E.C.2.7.1.37 BRENDA
Primary referenceStructural Analysis of the SH3 Domain of beta-PIX and Its Interaction with alpha-p21 Activated Kinase (PAK)(,)., Mott HR, Nietlispach D, Evetts KA, Owen D, Biochemistry 2005 Aug 23;44(33):10977-83. PMID:16101281
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (688 Kb) [Save to disk]
  • Biological Unit Coordinates (1zsg.pdb1.gz) 23 Kb
  • CSU: Contacts of Structural Units for 1ZSG
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1ZSG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ZSG from S2C, [Save to disk]
    • View 1ZSG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1ZSG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ZSG, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1zsg_A] [1zsg_B] [1zsg]
  • SWISS-PROT database: [Q14155] [Q13153]
  • Domain organization of [ARHG7_HUMAN] [PAK1_HUMAN] by SWISSPFAM
  • Domain found in 1ZSG: [SH3 ] by SMART
    • Other resources with information on 1ZSG
  • Community annotation for 1ZSG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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