2HC7 Dna date Jun 15, 2006
title 2'-Selenium-T A-Dna [G(Tse)Gtacac]
authors J.Jiang, J.Sheng, Z.Huang
compound source
Molecule: 5'-D(Gp(2st)Pgptpapcpapc)-3'
Chain: A
Engineered: Yes
 Synthetic: Yes
Other_details: Solid Phase Synthesis Via Phosphoramidite
symmetry Space Group: P 43 21 2
R_factor 0.170 R_Free 0.187
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.221 42.221 24.026 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.40 Å
ligand 2ST enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (8 Kb) [Save to disk]
  • Biological Unit Coordinates (2hc7.pdb1.gz) 7 Kb
  • LPC: Ligand-Protein Contacts for 2HC7
  • CSU: Contacts of Structural Units for 2HC7
  • Likely Quarternary Molecular Structure file(s) for 2HC7
  • Structure Factors (35 Kb)
  • Retrieve 2HC7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2HC7 from S2C, [Save to disk]
  • Re-refined 2hc7 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 2HC7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2HC7
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2HC7, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2hc7_A] [2hc7]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
    • Other resources with information on 2HC7
  • Community annotation for 2HC7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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