2L6X Proton Transport date Nov 29, 2010
title Solution Nmr Structure Of Proteorhodopsin.
authors S.Reckel, D.Gottstein, J.Stehle, F.Loehr, M.Takeda, R.Silvers, M.K C.Glaubitz, F.Bernhard, H.Schwalbe, P.Guntert, V.Doetsch, Membra Protein Structures By Solution Nmr (Mpsbynmr)
compound source
Molecule: Green-Light Absorbing Proteorhodopsin
Chain: A
Synonym: Gpr
Engineered: Yes
 Organism_scientific: Uncultured Marine Gamma Proteobacteriu Ebac31a08;
Organism_taxid: 133804
Strain: Ebac31a08
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector: Pivex2.3d
methodSolution NMR
ligand RET enzyme
Gene
Ontology
ChainFunctionProcessComponent
A
  • ion channel activity
  • light-activated ion channel ...


    • Primary referenceSolution NMR Structure of Proteorhodopsin., Reckel S, Gottstein D, Stehle J, Lohr F, Verhoefen MK, Takeda M, Silvers R, Kainosho M, Glaubitz C, Wachtveitl J, Bernhard F, Schwalbe H, Guntert P, Dotsch V, Angew Chem Int Ed Engl. 2011 Oct 27. doi: 10.1002/anie.201105648. PMID:22034093
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (1238 Kb) [Save to disk]
  • Biological Unit Coordinates (2l6x.pdb1.gz) 63 Kb
  • LPC: Ligand-Protein Contacts for 2L6X
  • CSU: Contacts of Structural Units for 2L6X
  • Original NMR restraints for 2L6X from PDB
  • Retrieve 2L6X in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2L6X from S2C, [Save to disk]
    • View 2L6X in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 2L6X
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2L6X, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2l6x] [2l6x_A]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Domain found in 2L6X: [Bac_rhodopsin ] by SMART
    • Other resources with information on 2L6X
  • Community annotation for 2L6X at PDBWiki (http://pdbwiki.org)
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