2M3L Solution structure of the C-terminal zinc-binding domain of HPV51 oncoprotein E6 date
authors Mischo, A., Ohlenschlager, O., Gorlach, M.
compound source
symmetry
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution
ligand ZN enzyme
Primary referenceStructural insights into a wildtype domain of the oncoprotein E6 and its interaction with a PDZ domain., Mischo A, Ohlenschlager O, Hortschansky P, Ramachandran R, Gorlach M, PLoS One. 2013 Apr 30;8(4):e62584. doi: 10.1371/journal.pone.0062584. Print 2013. PMID:23638119
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (487 Kb) [Save to disk]
  • Biological Unit Coordinates (2m3l.pdb1.gz) 25 Kb
  • LPC: Ligand-Protein Contacts for 2M3L
  • CSU: Contacts of Structural Units for 2M3L
  • Original NMR restraints for 2M3L from PDB
  • Retrieve 2M3L in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 2M3L from S2C, [Save to disk]
  • View 2M3L in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 2M3L
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 2M3L, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [2m3l_A] [2m3l]
  • SWISS-PROT database:
  • Domain organization of by SWISSPFAM
  • Other resources with information on 2M3L
  • Community annotation for 2M3L at PDBWiki (http://pdbwiki.org)

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