2UZH	Lyase	date	Apr 27, 2007
title	Mycobacterium Smegmatis 2c-Methyl-D-Erythritol-2,4-Cyclodiph Synthase (Ispf)
authors	L.Buetow, A.C.Brown, T.Parish, W.N.Hunter
compound		source
Molecule: 2c-Methyl-D-Erythritol 2,4-Cyclodiphosphate Synth Chain: A, B, C Ec: 4.6.1.12 Engineered: Yes Other_details: Each Contains A Zn Cation, Which Is Required Activity, And Cdp, A Fragment Of Substrate.		Organism_scientific: Mycobacterium Smegmatis Organism_taxid: 1772 Strain: Mc(2)155 Atcc: 700084 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_plasmid: Pet15tev (Variant Of Pet15b From
symmetry	Space Group: I 4	R_factor 0.163 R_Free 0.206
crystal cell	length a length b length c angle alpha angle beta angle gamma 159.121 159.121 54.160 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	ACT, CDP, EDO, GOL, IPE, PEG, ZN	enzyme	Lyase E.C.4.6.1.12 BRENDA
Gene Ontology	Chain Function Process Component A, C, B
Primary reference	The structure of Mycobacteria 2C-methyl-D-erythritol-2,4-cyclodiphosphate synthase, an essential enzyme, provides a platform for drug discovery., Buetow L, Brown AC, Parish T, Hunter WN, BMC Struct Biol. 2007 Oct 23;7(1):68. PMID:17956607

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (86 Kb) [Save to disk] Biological Unit Coordinates (2uzh.pdb1.gz) 79 Kb LPC: Ligand-Protein Contacts for 2UZH CSU: Contacts of Structural Units for 2UZH Likely Quarternary Molecular Structure file(s) for 2UZH Structure Factors (476 Kb) Retrieve 2UZH in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 2UZH from S2C, [Save to disk] Re-refined 2uzh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 2UZH in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 2UZH

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 2UZH, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [2uzh_C] [2uzh] [2uzh_B] [2uzh_A] SWISS-PROT database: [A0R559] Domain organization of [A0R559_MYCS2] by SWISSPFAM

Other resources with information on 2UZH

Community annotation for 2UZH at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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